Gene Cphy_0517 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_0517 
Symbol 
ID5743431 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp657952 
End bp658692 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content39% 
IMG OID641291629 
Product3-oxoacyl-(acyl-carrier-protein) reductase 
Protein accessionYP_001557643 
Protein GI160878675 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01830] 3-oxoacyl-(acyl-carrier-protein) reductase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAGAGA ATAAAGTTGC AGTGGTGACA GGCGCGAGCC GTGGAATTGG ACGCCAGGTC 
GCATTGACAC TTGCTAGTTA TGGAGCAACA GTAGTAGTTA ATTATTGTGG TTCAAAGGAA
CGTGCTGAAG AAGTAGTACA AAAGATTATA AGCGAAGGTG GGAAAGCTAT TGCTTATCAG
GCAGATGTTT CGGATGCAAA AGCTACAGAA GCTATGTTTG CTGATATCTT AGCAGAATTT
AAACAAGTTG ATATCTTAGT AAATAACGCT GGTATTACAA GAGATAACCT TATTATGAAG
ATGTCGGAAG AAGAATTTGA TGTGGTTATT GATACGAACT TAAAAGGTTG TTTTCACTGT
ATTAAGCAAG TGACTCGTCC AATGCTTAAG CAAAGAAGCG GAAGAATTAT CAATATCTCA
TCGGTCGTTG GTGTGATTGG GAATATAGGT CAGATAAATT ATTGTGCATC CAAAGCTGGT
GTGATAGGAA TGACAAAGTC AGCTGCCAGA GAATTAGGTT CTCGTGGGAT TACCGTGAAT
GCGGTAGCAC CAGGATTTAT ACAGACGGAA ATGACTGATG TTTTACCAGA GAATGCAAAA
GAGATGGTAC TTACACAAAT ACCGCTAAAG AAGTTTGGTG AGGTTACTCA TATAGCAGAA
ACAGTAGCAT TTTTGGCATC GGATAAAGCA GCTTATATTA CGGGGCAAGT AATACAAGTA
GATGGTGGAA TGGGAATGTA A
 
Protein sequence
MLENKVAVVT GASRGIGRQV ALTLASYGAT VVVNYCGSKE RAEEVVQKII SEGGKAIAYQ 
ADVSDAKATE AMFADILAEF KQVDILVNNA GITRDNLIMK MSEEEFDVVI DTNLKGCFHC
IKQVTRPMLK QRSGRIINIS SVVGVIGNIG QINYCASKAG VIGMTKSAAR ELGSRGITVN
AVAPGFIQTE MTDVLPENAK EMVLTQIPLK KFGEVTHIAE TVAFLASDKA AYITGQVIQV
DGGMGM