Gene Cphy_0513 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_0513 
Symbol 
ID5743427 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp654074 
End bp655546 
Gene Length1473 bp 
Protein Length490 aa 
Translation table11 
GC content37% 
IMG OID641291625 
Producthypothetical protein 
Protein accessionYP_001557639 
Protein GI160878671 
COG category[S] Function unknown 
COG ID[COG1306] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.484423 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAAAGA AAGATCGTTA TCTTGATTTT GATGCAAAAC GTAGGAAACT AAAATTTACT 
CGAAGAAGAA TAAAAGGTTT TCAAAATCGA GGGGTGTTAG CACTACTCAT TTTGGTAATT
GCTTTAGGGC TTGGTACATG TGTTTTCTTT TTTTTAAAAG CTAAGATGGA TAGGATTGGG
AAAAAAGAAC TTTCTGAAAA TCAATTAATT AAACAACAGC TTGAGGAATT ATCGGGTCGT
ACGGCATCTG GACCTTATGG AATGTGGATT GCTAAGCCAA TAGGGGAAAA GCTATTAGAG
CCTGTGGAAG ATCAGGAAGT TTGGATGACG AATTTTAAAG ATACTCGTAA AGCAGTTAAA
GCAAAGGGAA TATACATCAC TGCATCCAGA GCGAATAATA ATATCGATGA TTTATTAAAA
TTAGTAGATG ATACAGAACT TAACGCGATG GTAATTGATA TCAAAGATGA CGAAGGGAGA
ATCACTTACC AGATGCAATA TCAACCAGCC ATCGATATTA ATGCAACAAG AGGTTATATT
AGTGATATTA ATGGGCTAAT AAGTAAGTTA AAAGAACACG ATGTTTATCT TATTGCCCGT
GTTGTAGCAT TTAAAGATCC TGTACTAGCT GATAAAAGGC CAGAACTTGC ACTTAAGTTA
AAGGATGGTT CTACCTTTCG TGATAAGGAT AAGTTAGCGT GGGTAAATCC TTATAAAAAA
GAAGTATGGG ATTACTTAGT AGGAGTTGCA TCGCAATGTG CTTCGCTTGG TTTTGATGAG
GTTAACTTTG ATTACATTCG TTTTTCCACA GATAGTGGTA TGGCAAATGT TGATTTTGGG
GTGGAAGCTA CCACCAAAAC AAAAATTGAA ACTATAACAG AGTTTGTAAA ATATGCTTGT
GAACAATTAC GACCATTAGG TATCTTTGTA TCAGCGGATG TTTATGGAGC GATTATCAGT
AGCTCTGTAG ATGCGAAAAT CGTTGGGCAA AGTTATTTAG AGATGTCTAA ATATTTAGAT
TATATATGTC CTATGATTTA CCCTTCCCAT TATGGTGAAG GTTATTATGG AATTAAATAT
CCTGATACAG AGCCTTATAA TCTTATACTG GCGGCGCTAG ACGCTTCCAG AAAGGCATTA
AATCAAATAC CAGAGGGAGA ACACAAGGCG TTGGTTCGGC CTTGGCTTCA GGATTTTACC
GCCCCTTGGA TTAAACATTA TATTCGATAT GGTTCCAAGG AAGTCAGAGA ACAGATTGAA
GCTGTCTATG ATTCTGATTA CTCAGAGTGG CTTTTATGGA ACGGTAATAT GAATTATACC
AAGGAAGCGT TATATACGGA GGAAGAAGCA GCGATTCAAT ATGCCAATCG GCCAACGCCA
ACCCCTCTTC CAATGCCTTC GTCAATTCCA CTTCCAACTA GAGTTCCAAA CTCTGGTAAG
TATTATGATT CACCATGGAA ATCAGGAAAT TAA
 
Protein sequence
MRKKDRYLDF DAKRRKLKFT RRRIKGFQNR GVLALLILVI ALGLGTCVFF FLKAKMDRIG 
KKELSENQLI KQQLEELSGR TASGPYGMWI AKPIGEKLLE PVEDQEVWMT NFKDTRKAVK
AKGIYITASR ANNNIDDLLK LVDDTELNAM VIDIKDDEGR ITYQMQYQPA IDINATRGYI
SDINGLISKL KEHDVYLIAR VVAFKDPVLA DKRPELALKL KDGSTFRDKD KLAWVNPYKK
EVWDYLVGVA SQCASLGFDE VNFDYIRFST DSGMANVDFG VEATTKTKIE TITEFVKYAC
EQLRPLGIFV SADVYGAIIS SSVDAKIVGQ SYLEMSKYLD YICPMIYPSH YGEGYYGIKY
PDTEPYNLIL AALDASRKAL NQIPEGEHKA LVRPWLQDFT APWIKHYIRY GSKEVREQIE
AVYDSDYSEW LLWNGNMNYT KEALYTEEEA AIQYANRPTP TPLPMPSSIP LPTRVPNSGK
YYDSPWKSGN