Gene Cphy_0498 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_0498 
Symbol 
ID5743412 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp638612 
End bp641344 
Gene Length2733 bp 
Protein Length910 aa 
Translation table11 
GC content38% 
IMG OID641291610 
Productglycosyl transferase family protein 
Protein accessionYP_001557624 
Protein GI160878656 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG5009] Membrane carboxypeptidase/penicillin-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000157387 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTTTA GTAGAAAGGG TGTCGTAAAA AAACAACGCG ATATCAAGTC TACGAGTAAG 
CGACTTAATA CGAAGATTCG TATAACGCTT TTTCGTGTTA GTATGATATG CATTGTTTGT
CTTGGCATCG TTGGTGTTAT AGCCGTATCC GGAGCAGTTA AGGGAGTCAT TGAATCAGCC
CCAGACATCG GTCAGGTTAA CATCGATCCG GAAGGTTTCG CAAGCTACAT TTACTATAAC
GATGGTACCT TAGCACAAGA GTTAATTGGT GCAGAGTCCA ACCGTATCTT AGTTTCCATT
GACGAAATCC CAGATGTATT AAAACATTCC TTTGTCGCTC TGGAAGATGA ACGTTTTTAC
CAACATGATG GAATTGATGT TTATGGTATT TTTCGTGCTG GTTTCTCTGT ACTAAAAACG
CAAGGACTTG GCTTTGGTGG AAGTACCCTT ACACAACAGT TAATAAAGAT AAAAGTATTT
AATTATGGTA ATGAGGCAAA TGCTGTTGAT AAAATTGTCC GTAAGATACA AGAGCAATAC
CTTGCAATTA AACTGGAAGA CATCTACACT AAGGATGAGA TTTTAGAAGC TTATCTAAAT
AACATTAACC TTGGTAATGG TGCGTATGGT GTGCAAACTG CAGCTCAGAG TTATTTCGGA
AAAGATGTTT CTGAATTAAC GTTATCAGAA GCCTCTGTTA TTGCTCCAAT TGCTCTTTCT
CCAGTACGTT GTAATCCAAT TAACTATCCA GAAACAAATG CAAAACGTAG AGAAAGTTGC
CTTGATAATA TGCTACGTCT TGGATACATT TCTCAAAAAG AACATGATGA TGCATTAGCT
GATGATGTAT ACAGCCGTAT CAAACAATAC AATGAAGAGA AGGCACCAAG CACATATTAT
TCTTATTTCA CAGATGCAGT GATTGATCAA GTTTTATCCG ATCTTCAAAC AAAGAAAGGA
TATACCCAGG ATGACGCCTC CTATATGCTT TATAGTGGCG GTTTAAAGAT CTATACCACA
CAGGATAAAA CGATTCAGGG TATCGTAGAT AAATATTTTC AAGATGAAAA AAATTTCCCA
GCCGTTGGGG AAGGTTCTTA TTATGAAATG AAATACGACT TGTCTGTTTA TGATGACGAG
GATAAAGTTA CTCACTATCA CTTCAATGAT TTGCTTGAAT ATTTTAAGGA CTTTAAGGAT
ACACAGAGTC TTTACTATCA TGATCCATAT TCTTCAAAAG TAGGTATCAA CTCCTTAGGA
TACAGTAAAG AAGATATGGA AGCAAAAATT GAAGAATTCC GTAATTCAAA GGTAAAAGGT
GATCAGGTAT ATGTTGAGAA TAAACAAATT ACCTTACAGC CACAGACCTC AATGACTATT
ATGGACCAGC ACAATGGTGA CGTTGTAGCT TTATATGGTG GCCGTGGTAA TAAAACCGGT
AATCGTACAA CGAACCGTGC ATCTAGCTCC AAGCGTCAGG TTGGTTCTAC CTTTAAGGTA
CTAGCATCCT TCCTTCCAGC TCTTGATTCT GGTCGTTATA CATTAGCAAG TGTAATGGAT
GACTCAGAAT ACACTTATCC AAATAGTACA GATACAGTAA CCAACTGGAA TAAGAAGTAT
AAGGGCTTAA GTACGATGCG TGAAGCCATC TATAATTCTA TGAATATTAT TGCTTGCCGT
TTTATGGAGG CAGTAACACC AAGAAAAGGT TTTGATTATT TAACAAGTCT TGGTTTTAAA
TTAATCGAAT TAAAAGTTAT GGATAATGGA AAAACATATT CTGATATCGG TGTTCCTCTT
GCCTTAGGTG GTATTACTGA AGGTGTAACA AACGTAGAAT TAACCGCTGG TTATGCTGCG
ATTGCTAATG GCGGTGTTTA TAATGAGCCT ATTTATTATA CGAAGGTCGT AGACCAGAAT
GGTAAAGTTA TTCTTTCGAA CGAGCCAAGT TCAAAGCAGG TAATGTATAC TTCTACTGCA
TGGTTATTAA CGAATGCAAT GGAAGATACT ATTAAGAGAG GTACTGCAAC AAGCATTGGA
TTCCGTAATT ACTCCATGCC TATTGCTGGT AAGACCGGAA CCTCAACGAA AGACTACGAT
TTATGGTTTG TTGGATACAC TCCTTATTAT ACTTCTGCTA TATGGACAGG ATTTGACTAT
AATTTCCCAC AAAAGGAAAA ATCATACCAC AAAGTAATGT GGCGAAATAT TATGGAGGAA
ATCCATTCTA CTCTTAAGTT AGAGAATAAG GCATTTGCAA AACCAGACTC CATTGTATCT
GCTAGGATAT GTGCAAAATC AGGTCAACTA GCAATTCCAG GAGTTTGTGA TAAAGCATTA
GGCGGTGACA CCACAAGAGT CGAATATTTT GCTAAGGGAA CCGTTCCAAC ACAAACCTGT
ACGGTTCATC AAAAAGTAAG TATCTGTAAG GTATCTGGAC ATTTTGCAAG CCCTTATTGT
CCACTAGATT CCTTGGTGGA AAAAGTTTTC TTGATTAAAG ACGAAAAGAG TCAAACAGAT
GATACTCCAT ATATCTTACC AACAGGTGAT ATGACAACTC CTTGTCCAAT TCATAGTGAA
GGGACTGTTG CTCCACCAAC GGATGGCGAA GATAATGAGA CACCGATTGG GCCAGAGAAT
CCAGACGAAG GAAATAAGAT ACCGGTAGGA CCAACAACTA CACCAACACC TCCTCCAGTT
ATTATTATTC CGCCAACAGA TAATCAGCCT TAA
 
Protein sequence
MDFSRKGVVK KQRDIKSTSK RLNTKIRITL FRVSMICIVC LGIVGVIAVS GAVKGVIESA 
PDIGQVNIDP EGFASYIYYN DGTLAQELIG AESNRILVSI DEIPDVLKHS FVALEDERFY
QHDGIDVYGI FRAGFSVLKT QGLGFGGSTL TQQLIKIKVF NYGNEANAVD KIVRKIQEQY
LAIKLEDIYT KDEILEAYLN NINLGNGAYG VQTAAQSYFG KDVSELTLSE ASVIAPIALS
PVRCNPINYP ETNAKRRESC LDNMLRLGYI SQKEHDDALA DDVYSRIKQY NEEKAPSTYY
SYFTDAVIDQ VLSDLQTKKG YTQDDASYML YSGGLKIYTT QDKTIQGIVD KYFQDEKNFP
AVGEGSYYEM KYDLSVYDDE DKVTHYHFND LLEYFKDFKD TQSLYYHDPY SSKVGINSLG
YSKEDMEAKI EEFRNSKVKG DQVYVENKQI TLQPQTSMTI MDQHNGDVVA LYGGRGNKTG
NRTTNRASSS KRQVGSTFKV LASFLPALDS GRYTLASVMD DSEYTYPNST DTVTNWNKKY
KGLSTMREAI YNSMNIIACR FMEAVTPRKG FDYLTSLGFK LIELKVMDNG KTYSDIGVPL
ALGGITEGVT NVELTAGYAA IANGGVYNEP IYYTKVVDQN GKVILSNEPS SKQVMYTSTA
WLLTNAMEDT IKRGTATSIG FRNYSMPIAG KTGTSTKDYD LWFVGYTPYY TSAIWTGFDY
NFPQKEKSYH KVMWRNIMEE IHSTLKLENK AFAKPDSIVS ARICAKSGQL AIPGVCDKAL
GGDTTRVEYF AKGTVPTQTC TVHQKVSICK VSGHFASPYC PLDSLVEKVF LIKDEKSQTD
DTPYILPTGD MTTPCPIHSE GTVAPPTDGE DNETPIGPEN PDEGNKIPVG PTTTPTPPPV
IIIPPTDNQP