| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_0478 |
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| Symbol | |
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| ID | 5745238 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | + |
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| Start bp | 607410 |
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| End bp | 608126 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 641291590 |
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| Product | FliA/WhiG family RNA polymerase sigma factor |
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| Protein accession | YP_001557604 |
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| Protein GI | 160878636 |
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| COG category | [K] Transcription |
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| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
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| TIGRFAM ID | [TIGR02885] RNA polymerase sigma-F factor
[TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02980] RNA polymerase sigma-70 factor, sigma-B/F/G subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGACACAC TGGATTTAAT ACGTTTGTCT AAACAGGGAG ATAAAGTAGC GAGAGACCGT
GTAGTAACTG AAAATGTTGG ATTGGTTTGG AGCATCGTCC GTAGGTTTAT GGGACGAGGT
CATGAAGCGG AAGATTTATT TCAAATTGGA AGCATTGGGC TTATGAAGGC AATTGATAAA
TTTGATTTAA GTTATGATGT AAAATTTTCA ACCTATGCGG TTCCTATGAT AACAGGAGAG
ATAAAGAGAT TTCTTCGAGA TGACGGTATG ATAAAAGTAA GCAGATCTCT AAAAGAAACT
GCCGGGAAGA TACGACTAAT GAGGGAAACC TTGGAGTCAA AGAATGGTAG GGAACCAACC
ATTGAGGAAA TCGGAGAGGC CTTAGAGCTA GCAAAGGAAG AAGTAGTTAT GGCTCTTGAA
TCAGGTGCTG AGGTAGAGTC ACTCTATAAG ACAATTTATC AAGGAGATGG CAATGCAATT
TTCTTAATTG ATAAAATAGA ACAAACCGAT GATGCAAGCG ATGAAATGAT TGATCATATG
GCATTAAGAG AAGTGATGGA TTCTCTTGAT GAAAAAGAAA AGGATATCAT TCGCTTACGT
TATTTTAAAG ACAAGACTCA AACCGAAATT GCAAAACAGT TAGGAATTTC TCAAGTACAG
GTATCTAGGT TGGAGAGAAA AATATTAAGA ACAATGAGAG AACGTATGCT AGGATAG
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| Protein sequence | MDTLDLIRLS KQGDKVARDR VVTENVGLVW SIVRRFMGRG HEAEDLFQIG SIGLMKAIDK
FDLSYDVKFS TYAVPMITGE IKRFLRDDGM IKVSRSLKET AGKIRLMRET LESKNGREPT
IEEIGEALEL AKEEVVMALE SGAEVESLYK TIYQGDGNAI FLIDKIEQTD DASDEMIDHM
ALREVMDSLD EKEKDIIRLR YFKDKTQTEI AKQLGISQVQ VSRLERKILR TMRERMLG
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