Gene Cphy_0461 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_0461 
Symbol 
ID5745221 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand- 
Start bp589088 
End bp589747 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content32% 
IMG OID641291573 
ProductTetR family transcriptional regulator 
Protein accessionYP_001557587 
Protein GI160878619 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGAGA AAAATAACCA AAGAGTGAAG TTGTCAAAAA TGCTATTAAA GAATAGCCTT 
ATCCAAATAA TGCATGAAAA ACCAGTAGAA AAAATCACAA TAAAAGAACT CTGCGAAAAT 
GCAGGAATTA ATCGTTCTAC CTTCTATCTT TACTATACTG ATCCTGTTTC GTTGTTGGCT 
GAATTAGAGA ATGAAGTATT AGATAATGCA AAAATATTTC TTGGGAAAGT GGACTCTAAT 
CAAGATTCAC TTCCCTATCT AATCACATTT TTAGATTATA TAAAAGATAA CTCTATGATA 
TTTAATACCT TACTTCGTCC ACAGGAAAAC CTATCCTTCC AGACTAAATT CATGAAGGAT 
ATATTAGCTC ACCTAAAAGC TGCTGTCATG CTAAACTGCC CTCCTGACAT ATCAGAATAT 
ATTTATAATT ACGTAATCAT GGGAAGTCTA AGTGTAATTC AACATTGGAT TCAATGCGAC 
TATAATATTA AAAGTAATGA GATGGCAACT CTTATCTACC AATTATCAAA TACTGCTATT 
ATGAACTATG TTCCAAACAA CTCGAAAGTT AATCAAGCAA CTGCATCTAA TCCAACTATT 
AGAACAAGCT CACAGACTAA TCAAACTAGT AGAACAATCT CACAGTCTAT GACTACTTAA
 
Protein sequence
MAEKNNQRVK LSKMLLKNSL IQIMHEKPVE KITIKELCEN AGINRSTFYL YYTDPVSLLA 
ELENEVLDNA KIFLGKVDSN QDSLPYLITF LDYIKDNSMI FNTLLRPQEN LSFQTKFMKD 
ILAHLKAAVM LNCPPDISEY IYNYVIMGSL SVIQHWIQCD YNIKSNEMAT LIYQLSNTAI 
MNYVPNNSKV NQATASNPTI RTSSQTNQTS RTISQSMTT