Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_0439 |
Symbol | |
ID | 5745199 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | + |
Start bp | 559906 |
End bp | 560619 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 641291551 |
Product | ABC transporter related |
Protein accession | YP_001557565 |
Protein GI | 160878597 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1121] ABC-type Mn/Zn transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0164474 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCATTAA TTTCGTGTAG TGATACAGTT CTAGCTTATG ATGAGAAAGT TGTTGTATCA AATCTTAACT TTCATGTAAG GGAAGGAGAG TATCTTTGTA TTGTAGGGGA AAATGGATCT GGGAAATCAA CTCTGATTAA GACAATCCTA GGTCTTAAGA CGGTATCCTC CGGAACAATA ACCTATGGTG ATGGAATAAG AGCAAATGAA ATAGGATATC TTCCACAGCA AACAGAGATA CAGAAGGACT TTCCGGCATT AGTAAAAGAG GTTGTGTTAT CAGGGGGTCT TAATGGTTGT GGATTAAGAC CATTTTACAA TAAATATGAA AAAAGTAAGG CTCGTCGAAA TATGGAGTTG TTAAATATTG AGAACTTGGA AAACAAATGT TACAGAGAGC TATCGGGAGG ACAAAAGCAA AGAGTATTAT TAGCCCGTGC ATTATGTGCC AGCAAAAAGT TACTGCTCTT GGACGAACCT GTAACAGGGC TTGATCCCAA TGCCACAAAG GATATGTATG ATTTGATTGA GAAACTAAAC AAAGAAAATC ATGTTACAGT ATTAATGGTA TCTCATGATA TTAGTGCTGC TGTAAAGTAT GCAACTCATA TTCTTCATAT CGGAAATACT CCTTTATTTT ATGGAAGTAA AGGGGAGTAT TTAGAATCAG AGATCGGAAG GATTTATACT GGAAAGGCAG GGACATTATT ATGA
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Protein sequence | MALISCSDTV LAYDEKVVVS NLNFHVREGE YLCIVGENGS GKSTLIKTIL GLKTVSSGTI TYGDGIRANE IGYLPQQTEI QKDFPALVKE VVLSGGLNGC GLRPFYNKYE KSKARRNMEL LNIENLENKC YRELSGGQKQ RVLLARALCA SKKLLLLDEP VTGLDPNATK DMYDLIEKLN KENHVTVLMV SHDISAAVKY ATHILHIGNT PLFYGSKGEY LESEIGRIYT GKAGTLL
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