Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_0422 |
Symbol | |
ID | 5745182 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | + |
Start bp | 536737 |
End bp | 537597 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 641291534 |
Product | hypothetical protein |
Protein accession | YP_001557548 |
Protein GI | 160878580 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000000226876 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAAAAA ATCATTCCAG TTACATCTGG GGCGGACTAC TCGTGTTATT TGGAGTATTA TTAGCAGCGA GAGCAGTAGA TATCTTTACT TTTGATATCT TTTTTGATGG ATGGTGGACC TTATTCTTAA TCATACCATG TTTTATTAGT TTATTTAATC ATGGTGGTGA TAAAACTGCT AATTTGATTG GTTTATCAAT TGGTATCTTC ATGTTATTGT CTGCACAAGG ATTTATTACG TGGAGAATGT TTGGACCATT ATGTTTTGCA GCAATTCTAG TTTTTATTGG ATTAAATATG ATCATGCCAA AGAAGCATAG AGATCAAGAC TATTCCAGTC AAAATTATAA GACCTATCAA GGTAGTGGTA GTACTGATCA GACATACGAT AGAACTTATA CGTATGAACA GAACTTTGAT GGTACTGAGA ACGGACAGCA GTCTGGTAAT TATGGATCCA CACAGAATAC AGGTGGTTCA AACGATGCAA ACAGTGGGTA TCAAAATACT TACCAGGGTG CCAGGCAAAG CGGACAATTC GCATGCACCG CGGTCTTAAG CGGTAGGGAA TTACGTTTTG ATAATGAAGT ATTCCAAGGG GCTATGTTAT CTGCTTTATT GGGTGGAATT GAACTAGACT TAAGAAATGC TATTATCAGA GAGAACGTTG TGATTGAATG CAAAACGATT CTCGGTGGAA TAGATATCTA CGTTCCAAGC TATGTTAGAG TTGTAGTTAA CTGTAATCCA ATTCTTGGCG GTGTAGATAA CAAGACAATT ACACCATTAG GAGCGAATGA ACAAACTATT ACAATCTATT TGAATGCAAC TTGTGTTTTA GGCGGTATCG ATGTAAAATA G
|
Protein sequence | MKKNHSSYIW GGLLVLFGVL LAARAVDIFT FDIFFDGWWT LFLIIPCFIS LFNHGGDKTA NLIGLSIGIF MLLSAQGFIT WRMFGPLCFA AILVFIGLNM IMPKKHRDQD YSSQNYKTYQ GSGSTDQTYD RTYTYEQNFD GTENGQQSGN YGSTQNTGGS NDANSGYQNT YQGARQSGQF ACTAVLSGRE LRFDNEVFQG AMLSALLGGI ELDLRNAIIR ENVVIECKTI LGGIDIYVPS YVRVVVNCNP ILGGVDNKTI TPLGANEQTI TIYLNATCVL GGIDVK
|
| |