| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_0420 |
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| Symbol | |
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| ID | 5745180 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | + |
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| Start bp | 534111 |
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| End bp | 535304 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 641291532 |
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| Product | patatin |
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| Protein accession | YP_001557546 |
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| Protein GI | 160878578 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0379208 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAGGAT TCGATTTTTC AAAAGAATAT GGAATCGTGC TGGAAGGTGG AGGTGCCAAG
GGAGCTTACC AAATTGGAGT TTGGAAAGCA ATGAGAGAAC TAGGCATCAA AATTAAAGGA
ATCAGCGGAG TATCCGTAGG TGCTTTAAAT GGAGCTCTCA TCTGCATGGG AGATTTTGAT
AAGGCAATAA AGCTTTGGGA GAGCATAACT TATGACAGAG TTATGGAAGT TGATAATGAA
CAGATGGAAC ATCTGATAAA ACGTGAGTTA AAGCAGTTGA AATTGGTGGA TTTAACTAAG
ACAGGGATGA GGGTTCTTGC TTCTCGAGGT TTTAAAGTTG CGCCATTAAA AAGCATGATT
GAAGAGGTTG TCGATGAAAA TAAAATTCGT GAATCTAATA TTGAATTTTA TTTAGGAACA
TTTTGCATTA GTGACATGAA GCAATTAGAG ATCTGCGCTG CAGAAGCTGA ACCAGAAAAA
TTAAAAGACT ATCTTTTAGC AAGTGCATAT TTCCCTGCAT TTAAAAATGA AAAGCTTCAT
GGACTTAGTT ATGTAGATGG CGGAGTTATG AATAATGTGC CAATCGATAC TCTGATTAAA
AATGGATATA AAGACATCAT TGTTGTTCGT ATCTATGGGA TTGGTGTAGA GAAACGTGTG
AAGATACCGG AAGATGTTAG GGTAACAACA GTTGCACCGA GGGTGGATCT AGGTAGTATT
TTGGAGTTTG ATGGGAAAAA GACGCAGCGG AATATAACCA TTGGCTATTT TGATGCGATG
AGAGTATTCA AATTCTTAAA GGGAAAGATA TATTATGTAG ATGCAATGCT TAATGAAAGA
GATTGTTTAG AGCTATTTTT AGAATGTCAT CCAAGCGTTA CAATGGCCTA TCACGAATAT
TATAAACTCG ATTACTCCAA TGAAGCTCTT TATACCAGAG ATATGTTAGA GACGATTCTA
CCTCTTATTG CGGAGGAACT AAAATTAGCG AAAGATTGGA GCTATTTTGA TTTATATCTC
GCCCTACTCG AACTTTGCGC TAAATATATG CATGTCCAAA AGTATTATAT TTATACAGAA
CAAGAATTAG TTAACAAGAT AAAAATAAAA TATGAACTTC GAAAGAAGAG GCATGATTCT
AAAGAAATAC CACCATTTGT ACAGCTTGCT CTAGGATTCA TAACCATACA ATAG
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| Protein sequence | MEGFDFSKEY GIVLEGGGAK GAYQIGVWKA MRELGIKIKG ISGVSVGALN GALICMGDFD
KAIKLWESIT YDRVMEVDNE QMEHLIKREL KQLKLVDLTK TGMRVLASRG FKVAPLKSMI
EEVVDENKIR ESNIEFYLGT FCISDMKQLE ICAAEAEPEK LKDYLLASAY FPAFKNEKLH
GLSYVDGGVM NNVPIDTLIK NGYKDIIVVR IYGIGVEKRV KIPEDVRVTT VAPRVDLGSI
LEFDGKKTQR NITIGYFDAM RVFKFLKGKI YYVDAMLNER DCLELFLECH PSVTMAYHEY
YKLDYSNEAL YTRDMLETIL PLIAEELKLA KDWSYFDLYL ALLELCAKYM HVQKYYIYTE
QELVNKIKIK YELRKKRHDS KEIPPFVQLA LGFITIQ
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