Gene Cphy_0416 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_0416 
Symbol 
ID5745176 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand+ 
Start bp528520 
End bp529173 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content37% 
IMG OID641291528 
ProductTrkA domain-containing protein 
Protein accessionYP_001557542 
Protein GI160878574 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0569] K+ transport systems, NAD-binding component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.000000130553 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAGAA AAGAATTTGT AGTTTTTGGA TTAGGCCGTT TTGGTAAAAG CGTAGCAACC 
ACGCTTGCAG AAGGTGGATG TGAAGTAATG GTTGTAGACA ACGATGAAGA TAAAATACAT 
GAAATTGCGG ATTATGTTAC TTATGCGGTA CGAGCTGATG TAACAGAAGC CGAATCATTA 
GAAAGCCTTG GTCTGAGAAA TTTTGATGGT GCAGTTATAG CGATTGGTGA GAATTTAGAG 
GCAAGTGTTA TGGTAACAAT ACTTGTAAAA GAGTTAGGAG TACCTTACGT TCTTGCGAAG 
GCACAAAATG AGCTACATGC GAAAGTGCTA AAGAAGGTTG GAGCTGATAT GGTGGTATTT 
CCAGAGAAAG AAACTGGAAT CCGTATCGCA AACAATTTGA TGATGGGAAA TTTCTTTGAT 
GCAATTGAAT TGTCTTCTAC ATCTAGCATG ATGGAGCTTG ACATCTTACA AGAATGGATA 
GGACATTCTT TACGAGAGTT AAATTTACGC GCTAAAAATA AAATTAATGT AATTGGGATC 
AAAAGAGATG ACCAGCTTAA TATCAATCCA GATGCAGATA TGCCACTGGA AAGAAATGAT 
GTATTAGTTA TCATCGGTAA AAATGAGATA TTAAATAAGT TAGCGAATCA GTAA
 
Protein sequence
MARKEFVVFG LGRFGKSVAT TLAEGGCEVM VVDNDEDKIH EIADYVTYAV RADVTEAESL 
ESLGLRNFDG AVIAIGENLE ASVMVTILVK ELGVPYVLAK AQNELHAKVL KKVGADMVVF 
PEKETGIRIA NNLMMGNFFD AIELSSTSSM MELDILQEWI GHSLRELNLR AKNKINVIGI 
KRDDQLNINP DADMPLERND VLVIIGKNEI LNKLANQ