Gene Cphy_0397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_0397 
Symbol 
ID5742265 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp509392 
End bp510393 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content39% 
IMG OID641291509 
ProductD-isomer specific 2-hydroxyacid dehydrogenase NAD-binding 
Protein accessionYP_001557523 
Protein GI160878555 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAAATA TATTGGTTAC GATCCCAACA TTAAGTGCAG TATTCCCAAC ATTTTTTGAT 
GATAAGCGAA AGAGAGAACT TGAAAGCATC GGTAATGTTA TCTGGAATGT TTCTGACAAG
CAATTTTCAA AAGAGGAATT TACGGAAAAA TTAAAAGACA TCGATATTTG TGTAACAGGC
TGGGGAACTC CTGTGATGGA GGAAGAAGTA TTAACCTACG CGAATCGTCT TCGATTTATC
GCTCATACCG GTGGTTCCGT AAAACCTTAT GTAACGGATG CTTGCTATGA GAGGGGAATT
CGTGTAGTTA GTGGTAACTC AGTTTTTGCA GAAAGCGTTG CAGAAGGTGT AATAGCCTAT
GCTCTTTCTT CCTTAAGAGA TATTCCGAGA TTTTCTTATG AGCTTAAGCA GGGAATATGG
CCAGCCCAAT TTTATAATCG TGGGTTATTG GAACGAAAGG TTGGCATTGT TGGTTATGGA
ATGATTGCCC GCTATGTAGT ATCGATGCTA AAACCATTTC ATTGTGGGAT AAAAGTATAT
TCCCGCCATA TTGCTAACGA AGAGTTAGAG CAGCATCAGA TGGAAAAGGC TACCTTGGAT
GAGATTTTCA GTACTTGTGA TATTATCTCT ATTCATAGTG GGATGACACC GGAGAATCAC
CACCTAATAA CAGAAGAACT ATTAAATCAA ATGAAACCTG GAGCCCTATT AATCAATACA
GCAAGAGGAG CTATTATTGA CGAAGAAGCA TTAATTAAAG TTTTAGATAA GAAGGAGATT
TATGCAGCTC TTGATGTCTA TGAAACAGAG CCATTGCCTT CTGACCATCC TTTACTAGAG
TGTGAAAATG CTTTACTGCT TCCTCACATG GGAGGGCCGA CCATTGACCG CAGATTGTCT
GTAACTTCCT CTGTGATTAC GGATATTCAT AATTTTATAG ATGAGAAGCC TCTCCTCTGT
GAGATAAGCG CGTCATATGC CGCAAAGATG TCAATGTATT AA
 
Protein sequence
MLNILVTIPT LSAVFPTFFD DKRKRELESI GNVIWNVSDK QFSKEEFTEK LKDIDICVTG 
WGTPVMEEEV LTYANRLRFI AHTGGSVKPY VTDACYERGI RVVSGNSVFA ESVAEGVIAY
ALSSLRDIPR FSYELKQGIW PAQFYNRGLL ERKVGIVGYG MIARYVVSML KPFHCGIKVY
SRHIANEELE QHQMEKATLD EIFSTCDIIS IHSGMTPENH HLITEELLNQ MKPGALLINT
ARGAIIDEEA LIKVLDKKEI YAALDVYETE PLPSDHPLLE CENALLLPHM GGPTIDRRLS
VTSSVITDIH NFIDEKPLLC EISASYAAKM SMY