| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_0384 |
|---|
| Symbol | |
|---|
| ID | 5742252 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | - |
|---|
| Start bp | 490581 |
|---|
| End bp | 491561 |
|---|
| Gene Length | 981 bp |
|---|
| Protein Length | 326 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 641291496 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001557510 |
|---|
| Protein GI | 160878542 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4129] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAGT TTAACAAAGT TAGTAAGATT GCAGTCGGAA GTACCCTTGC TATTTTACTA
GCTAATGCAA TTGGATTAAA CTATAGTATT TCAGCGGGGA TTATTACTCT TCTAACCATA
CAGGATACTA AAAAAGAGAC CATTTTTATT TCACTGAAGC GATTAGTTGC ATTTATGTTT
GCCACTATTC TAGCACTCTT ACTTTTTCCG AACTTTGGAT TTACCACAAT TCCTTTTGGA
TTATTCCTAT TTTTGTTTGT AGGTGGCTGT TCTATTGTTA AATTACAAGA TGGAATTGCA
ATGAATTCCG TACTTGCAAC ACATTACATT CTCTCTGAGA GTATAAGTAT TTCCATGATA
ACAAACGAAG CCCTCCTTCT TTTTATCGGA GCGGGTATTG GAACACTCAT TAATTTATTT
ATGCCAAGTA ATGTAGCAAA AATTCGAGAA GTTCAAGAAC GAATTGAAGC CGATTTACGT
AAGATCTTAT TTCGCATGGC TTATTTTCTT AGGGAGTCTG ATAAAAGTAA TTATAAAGAT
CACTGTTTTA CTCCATTAAA AGAAGATATT AACCTAGGTC TTACGTATGC ATATACAAAC
ATGAACAATA CTTTATTCCA GGAGTCTGAA TACTTTATTC GTTATATGGA GATGCGTAAA
CACCAACTAC AGATACTTGC TGAAATTTAT GAAAAAATAA TATCCCTACA CGCTGTACCG
AAGCAAGTTT TACCGATTTC ACAGTTTATA GAAAGCATTG CAAATTCTCT AGCAGAATCC
AATAACGCCA AAGGATTATT ACAATTAGAG AAAACTCTTG AAGAAGAATA TCGCCAAAGC
CCTCTCCCAA CTACCAGAGA GGAATTCGAA GACCGAGCTG TGTTATTTAT GATATTGAAA
GATTTTAAGA TGTTTCTCTT AATTAAAGAG CAGTTTGCAG ATACATTAAC AAAGGACCAG
ATACAAAAGT ACTGGTCCTA G
|
|---|
| Protein sequence | MKKFNKVSKI AVGSTLAILL ANAIGLNYSI SAGIITLLTI QDTKKETIFI SLKRLVAFMF
ATILALLLFP NFGFTTIPFG LFLFLFVGGC SIVKLQDGIA MNSVLATHYI LSESISISMI
TNEALLLFIG AGIGTLINLF MPSNVAKIRE VQERIEADLR KILFRMAYFL RESDKSNYKD
HCFTPLKEDI NLGLTYAYTN MNNTLFQESE YFIRYMEMRK HQLQILAEIY EKIISLHAVP
KQVLPISQFI ESIANSLAES NNAKGLLQLE KTLEEEYRQS PLPTTREEFE DRAVLFMILK
DFKMFLLIKE QFADTLTKDQ IQKYWS
|
|---|
| |