| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_0381 |
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| Symbol | |
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| ID | 5742249 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | + |
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| Start bp | 486104 |
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| End bp | 487459 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 641291493 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_001557507 |
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| Protein GI | 160878539 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00954667 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGAATGA AAGAAAACAA AGACTATTTA CTTAAGGGCA CCTTATGGAA AGCTATATTA
ATGCTAGCCA TACCAATCGC CGTGAACAAT TTTATTCAAA CGATGTATAA TCTAACAGAT
TCCTATTGGC TTGGTAAAAT TGGTACAGAT CCACAGTCAG CCATAACGGT AGTAACTCCG
ATTCAGAGTA TCATAGTTAA TTTTGGTACT GGTATTACTG TAGCTGGAGC GATATTAATA
TCGCAGTACT TAGGTGCCAA GGATGAAAAG AATGCAAAAT CAATGGTTGG ACAGCTGTTT
GCTTCTTGTA TGATATTTTC GGTTGTATGT GCAGCAATAT GTTTTTTGTT AACTCCAGCG
TTGGTTGGAT GGTTAGCTGG TGGTGAGTCA TTTTCTTCTA TGGCAGTTAC CTATTTACGA
ATTGTAATAT TGGACATGCC ATTTTTATTT ACCATCAATA TCTTTACTGC GGTAAATCAA
TCGCAGGGGG ATACCGTAAG ACCAATGTTT TTAAATCTAC TAGGTATTGT TTTAAATATG
ATATTGGACC CTCTTTTTAT GTTAGGATTT GGCTGGGGTG TTGCTGGTGC AGCATTAGCT
ACTTTATTAG CGAAGGTTCC ATGTGCGATA ATTGCATTAT ATAGCCTATG TAATAATAAG
AAATCTCTTT ATATAACAAA AGAAAGTTTA AAGATTCAAA AGGATAAACT TAAGTCAATT
GCGAAAATAG GTTTACCTAC TGCGATTGGC GGAAGTACCA TGCAATTAGG ATTTTTATTG
ATGACCTCTA GTGTAATTAA GTATGGATCT ACTGCAGTTA GTGCTTATGG TATAGGAAAC
CGTGTCAATG GACTAGTTAC GATGCCTGCG AATGCCATGG GTTCTGCGGT TGCAACAATT
GTTGGACAAT GTATCGGAGC AAGGGATCAG GTTAGAGCTC AAAAAGCTTA TTTAATGGCA
AGAAGAATTG CCGTTATTTT CTTGTTTATT GGTGGTTTGA TTTTATCGCG GAATACTGTT
TCAGAGCCAA TTGTTCGAAT TTTTAGTAAT GATCCAGATG TAATTCGACT AGGTACGCAG
TTTCTTCAAT TGATGGCATT TTGGTGCTTT ACGAACGGTA TTTACACAAC AACCAACGGA
TTGCATCAAG GATCTGGCCA TACAATGATT AATATGACAA TTGATGCAAC TAGACTATGG
GTATTCCGAC TGGCAACGTT ATTCATATGT GAACGTTTAC TCCATATGGG AGTACAAAGT
ATATGGTATG CAGTTGTAGT CAGCAATGGA ATTTCCGCAG TAATCTTGTG GATTATCTAC
AAGATGGGTG TTTGGAAAAA GCAGGTCATC TCCTAG
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| Protein sequence | MRMKENKDYL LKGTLWKAIL MLAIPIAVNN FIQTMYNLTD SYWLGKIGTD PQSAITVVTP
IQSIIVNFGT GITVAGAILI SQYLGAKDEK NAKSMVGQLF ASCMIFSVVC AAICFLLTPA
LVGWLAGGES FSSMAVTYLR IVILDMPFLF TINIFTAVNQ SQGDTVRPMF LNLLGIVLNM
ILDPLFMLGF GWGVAGAALA TLLAKVPCAI IALYSLCNNK KSLYITKESL KIQKDKLKSI
AKIGLPTAIG GSTMQLGFLL MTSSVIKYGS TAVSAYGIGN RVNGLVTMPA NAMGSAVATI
VGQCIGARDQ VRAQKAYLMA RRIAVIFLFI GGLILSRNTV SEPIVRIFSN DPDVIRLGTQ
FLQLMAFWCF TNGIYTTTNG LHQGSGHTMI NMTIDATRLW VFRLATLFIC ERLLHMGVQS
IWYAVVVSNG ISAVILWIIY KMGVWKKQVI S
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