| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_0344 |
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| Symbol | |
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| ID | 5742190 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | + |
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| Start bp | 437841 |
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| End bp | 438587 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 641291434 |
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| Product | membrane protein-like protein |
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| Protein accession | YP_001557470 |
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| Protein GI | 160878502 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3601] Predicted membrane protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00594365 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAAAACT TGGAGAAACT AATGGAAGTA GCAAAAACCA ATGTCGGATT TTTGTTGCTA
AGTGTAACGA TTGTTGCAAT TATTGTTGGA GCTGCCTATG CAGCTGAGCG TGTCATTAGG
AAAAAAATCG GATTAGATAA AAGAAGAGGA AAACAAAGTG TACGCAGTAT GGTGATTATA
GCAGTACTTT CCACAATAGC AGTTGTTTTG ATGCTCTTTG AGTTTCCATT ATGGTTTGCC
CCTGGTTTCT ATAAACTTGA CTTTAGCGAG CTTCCGGTGG TTATTGGTGC ATTTACGTTA
GGTCCGGTAG CTGGGATAAC GATAGAGCTT ATTAAAATTG TCCTAAACTT ACTATTAAAT
GGAACGACAA CAGCATTTGT TGGGGAGTTT GCGAACTTCT TAATGGGTTG TGTATTTATT
ATTCCAGCAT CTTTCTTCTA TTTCCTAAGA AAGAGTAAGA AAAATGCAGT GATTGGATTA
CTTGTTGGAA CAGTAATAGC TACATTAACT GGATGTTTCT TAAATGCATT TGTTTTATTA
CCTAAATATT CAGAAGCCTT TCACATACCA ATTGAAGCTT TTATTGCACA AGGTACGGAA
AAAATATCTG CGATCAAGGG TATGTTTACT TTTGTAGTGT TAGCAGTTGC ACCATTTAAT
TTGTTAAAAT ATGCATTGGT ATCGTTAATT ACCATTTTAA TTTACAAAAA TATAAGTAAA
ATCCTAAAAG GAGATTACAA AGATTAG
|
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| Protein sequence | MENLEKLMEV AKTNVGFLLL SVTIVAIIVG AAYAAERVIR KKIGLDKRRG KQSVRSMVII
AVLSTIAVVL MLFEFPLWFA PGFYKLDFSE LPVVIGAFTL GPVAGITIEL IKIVLNLLLN
GTTTAFVGEF ANFLMGCVFI IPASFFYFLR KSKKNAVIGL LVGTVIATLT GCFLNAFVLL
PKYSEAFHIP IEAFIAQGTE KISAIKGMFT FVVLAVAPFN LLKYALVSLI TILIYKNISK
ILKGDYKD
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