| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_0342 |
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| Symbol | |
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| ID | 5742188 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | + |
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| Start bp | 432371 |
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| End bp | 434707 |
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| Gene Length | 2337 bp |
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| Protein Length | 778 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 641291432 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001557468 |
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| Protein GI | 160878500 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGGAAA AACAAGGTAG CATAAACTAT AAAAAGCAAA TATTCATAAT TATTATGACA
GGTGCATTAT TGCCGGTAAT TTTATTGGCC TTGTACTTTT ATTATACCTA TATTCATGAA
GTGAGTGACA AAATCGATTT ATCGAATGCC AAAGCGTTAG AACAAGTTAG GAACAAAGTA
GAAAATGTAA CAGAGACGAT GCAATTAAAC TACATGTCTT CCCTTTGGAA GGGTGATTAT
GTAGTGAAAG AGGATTCTAT CGATTGGTTT ATGAAAAACA TTGTTTCTTA CAGCGATTAT
TCTAATTTAA AGAAAGTACA GGATGAACTC TTAGGTGCAA CCTACTTAAG GATCTATATC
AATAGTTTTT ATTTTATTAA TTTCTCAACT GGTTGGGTTT TAACAAGCAA TGGTATGTAT
CCTTTAAATG AAGTGGTAAA TCAAGAACAA TTGTATGATC TTTTCTATAC TGGGATGAGT
GACTGCAAGT GGACATATCT AAGTATAGAA AATGAAGGGA AGGGAAATCG TGTTATTAAA
TCCGACTATA TTACGCTAGC GATTAAGGCT CCTCTCAACC TTAAAAGCCC AAATTGCTTG
TTGTTAGTTA ATTTAAGTAG CGTAGGGTTT GAAAGACTTC TTAGAAATAG CTTAAGCAGT
GGAAAATTGA CCGTTTTTGA TGCACAGGGA AAACTCTTAT TCACAGAGCA TAAAGAAGTT
TCAGAATTTC TTGATGAGTA CATAAAAGAA CATAATACAA CAATAGAATC CTTGGTAGAA
AGGCGAGATG AACTTAGTAA GAAGAGTGGT TTTAATTTGA ACTTCTCCTA TTCTGGAGCC
AATGGATGGC TTTATGTATC CAGTTATGAT CCAGCTATTG TGACTCGTGA GGCAAGTTCT
ATTATAATAA CTGCCGGACT CTTAATACTA TTTATGATGA CACTTATTTT TCTTTTCTCT
GTCGTAGGTT CTCGAACAAT TTATCGTCCA GTATCTCAGT TGGTAACAAA TCTAAGAAAT
ATAGAGGAAA TAGAAGAGGT AGCAGGACAA AAAGAGAATG AATTCAAATT TATCGGGAAA
CGAATTAATC GATTAGTTGA TTCAAAAAAT GATATGAAAG AATTAATACA GGTTCAACAA
AAGCAGTTAA AGGAATTGTT CGTCCTTCGT CTATTAAAAG GAGAAGTAAG AGAAGAGAAT
ATTGAATCTA ATTTAAAAAA CTTTGGATTC GAAAAAATGA GATATATTTC AATGATTACG
ATTAGTGTTT CATCGAAAGT AATAGAGGAA GACTGGGACT ATACAAAACA AGATATGATA
AAAATAAGTA TCGTGGAAAA CATGCCGGAA TTTATTAGTG ACCAGCTTTT ATTTCCTACC
GTTACAAATT CAAATGTAAT TCTTTGCACA ATTACGAGAG AGTTAAAAGA AGAACTTGAA
GCGGCATCAA TTGAATTGAT TCGCCACCTT ACCGATTATA TCGTGATGGA AAGTGGATAT
CATGCAAACT TTGGCATCAG CCAACCTTTT GACAGCCTTA TGAAATTCAG ACAGGCTTAT
AATGAAAGTT TAGAAGCGGT CAAAAATAAT GAAACCTTAA ATAGAGAAAA TACCATATGT
GAGCAGCAAA ACTTTATATT TTATTCTGAT ATAGCGAATA GTAACTCGAA TAACTATACC
TATGAACTTA TTTTAGAGAA AGAGATGAAG GCAGCAGTGG ATGAGTGCGA TAAAGAGAAA
GCATTTTTAT TGGCAGATAC TTTTATTAAC CACATGGCAG AAAGCGGTGC TGTTCTAAAT
GAGCTTCATT TTTATCTTCA TCGATTCATG GTAGCAGTAA TATTAGTAGC AACAGATGCC
GGTATTTCGG TAAATGATAT TTTGGGTCAT GGATCGGTAA ATGTATTTTT GCAATTTAAT
CAACTTTCGG ATTTAGATAA AATTCGAAGC TTTTATAAGC ATAATATTAT TTCACCGGTG
ATTAAACAGT TAAGTACATT CCGAAGAAGT AATTCTGATC TTGTATTAGA TAAGATAGTT
AAGTTGGTGA GAGAAACCTC TAGCGATATC ACATTAACAG AATGTGCAGA TCAACTGGGG
TATCATCCAA GTTATATTTG GAAGATTATG AAGAGTAAAA TTAATATGAC GTTTACCGAT
TATGTAACAA TACAAAGACT TGAAATTGCG AAGAAAATGC TATTAGAAAC GGACAAATCG
GTAGCAGAAA TTGCAGAACA ATTAAAATAC ACCAATGCAC AGAACTTTAT ACGTTTTTTT
AGTAAACATG TTGGGACAAC ACCGGGAAAA TTTAGACTGA TGGACAGAAA TTCATAA
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| Protein sequence | MEEKQGSINY KKQIFIIIMT GALLPVILLA LYFYYTYIHE VSDKIDLSNA KALEQVRNKV
ENVTETMQLN YMSSLWKGDY VVKEDSIDWF MKNIVSYSDY SNLKKVQDEL LGATYLRIYI
NSFYFINFST GWVLTSNGMY PLNEVVNQEQ LYDLFYTGMS DCKWTYLSIE NEGKGNRVIK
SDYITLAIKA PLNLKSPNCL LLVNLSSVGF ERLLRNSLSS GKLTVFDAQG KLLFTEHKEV
SEFLDEYIKE HNTTIESLVE RRDELSKKSG FNLNFSYSGA NGWLYVSSYD PAIVTREASS
IIITAGLLIL FMMTLIFLFS VVGSRTIYRP VSQLVTNLRN IEEIEEVAGQ KENEFKFIGK
RINRLVDSKN DMKELIQVQQ KQLKELFVLR LLKGEVREEN IESNLKNFGF EKMRYISMIT
ISVSSKVIEE DWDYTKQDMI KISIVENMPE FISDQLLFPT VTNSNVILCT ITRELKEELE
AASIELIRHL TDYIVMESGY HANFGISQPF DSLMKFRQAY NESLEAVKNN ETLNRENTIC
EQQNFIFYSD IANSNSNNYT YELILEKEMK AAVDECDKEK AFLLADTFIN HMAESGAVLN
ELHFYLHRFM VAVILVATDA GISVNDILGH GSVNVFLQFN QLSDLDKIRS FYKHNIISPV
IKQLSTFRRS NSDLVLDKIV KLVRETSSDI TLTECADQLG YHPSYIWKIM KSKINMTFTD
YVTIQRLEIA KKMLLETDKS VAEIAEQLKY TNAQNFIRFF SKHVGTTPGK FRLMDRNS
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