Gene Cphy_0327 details

Gene Information

• Locus tag: Cphy_0327
• Symbol: uvrC
• ID: 5744250
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium phytofermentans ISDg
• Kingdom: Bacteria
• Replicon accession: NC_010001
• Strand: +
• Start bp: 409162
• End bp: 411048
• Gene Length: 1887 bp
• Protein Length: 628 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 641291417
• Product: excinuclease ABC subunit C
• Protein accession: YP_001557453
• Protein GI: 160878485
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0322] Nuclease subunit of the excinuclease complex
• TIGRFAM ID: [TIGR00194] excinuclease ABC, C subunit

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 0.00000467295
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTTGACT TAGACGAAGA ACTGAAAAAA CTTCCCGCGA AGCCAGGTGT CTACATAATG 
CACAATAATA AAGACGAGAT TATCTATGTA GGCAAGGCAA TCAGTCTAAA AAATCGTGTA 
AGGCAGTATT TTCAGAGTAG TAGAAATTTA TCAACAAAGA TACAGCAGAT GGTAAGTAAT 
ATCGACCATT TTGAATACAT TATCGTAGAT TCTGAGATGG AGGCACTGGT ACTTGAGTGT 
AACTTAATTA AAGAGCACCG TCCAAAGTAT AATACGATGC TTAAGGATGA TAAAAGCTAT 
CCTTATATTA AAGTAACTGT GAATGAGGCT TATCCAAGAG TACTATTTGC AAGACAGCAG 
AAAAAAGATA AGGCAAAGTA TTTTGGCCCA TATACGAGTT TGGGGGCAGT GAAAGATATT 
TTAGATCTAC TTCGTCGTCT TTATTTTATT CGTACCTGTA ATCGTAATCT GCCAAAAGAC 
ATAGGTTTAG AACGTCCTTG TCTTTACTAT CATATCAAAC AATGTAAGGC GCCATGTCAA 
GGGTATATTT CGGAAGAGGA ATATCGTAAG TCGATTGATG AAGTTATTGA GTTTTTGAAT 
GGAAACTATG CACTAGTTAC GAAGGATTTA CAAGCTAAGA TGAAGGCAGC CTCCGAAAAC 
TTAGAATTTG AAGAAGCAGC AGGGTATCGT GATTTAATAC TTAGTGTTGA AAAATTAAGC 
CAGAAACAAA AGGCGTCTGA TGTGGATGGC GTTGATCGAG ATATTATAGC ATTTGCAAGT 
ACTGGCGACG AAGCAGTAGC TCAGGTATTT TTTATTCGAG ATGGTAAGAT GCTAGGAAGA 
GAACATTATC ATATTACTGG AGTGGCAAAT GAGAGTAGGT CGAGTATTAT GACTAACTTT 
GTAAAGCAAT TTTACGCAGG AACTCCGTAC ATCCCTAGAG AGTTATTATT ATCAGAGCCT 
TTAGAAGAAG AGGAACTAAT CAGTGAATGG TTAAGTACAA AGCGAGGACA AAAGGTAAGA 
ATTCATGTTC CGAAAAAGGG AGATAAAGAA CGTCTTGTTG AGCTTGCTGA AAAAAATGCA 
TCACTGGTAT TACAACAAGA TTCTGATAAG ATACAACGGG AAGAAGCTAA AACCATTGGA 
GCTGTTAGGC ATATTGCAGA TATGCTTTCT CTTCCTGGGA TATATCGTAT GGAATCCTTC 
GATATCTCTA ATACCAACGG ATTCGAATCT GTTGGTTCTA TGGTAGTTTA TGAAAATGGT 
AAACCAAAAC GAAATGATTA TCGAAAGTTT AAAATTAAAT CAGTACAAGG ACCAGATGAC 
TATGCTTCGA TGCGAGAGGT ATTGACTAGA AGGTTTTCTC ATGGTCAAAA GGAAGCGGAA 
GAACTCGCTA AGAAAAATAT CGATATTAGT CATGGAAGTT TTACGAGATA TCCGGATTTG 
ATTTTAATGG ATGGTGGTAG AGGACAGGTA AATATTGCTC TAGAGGTAAT GAATGAACTT 
AAATTAACTA TTCCAGTTTG CGGTATGGTG AAGGACGACA ACCATAGAAC TCGAGGGTTA 
TATTTTGATA ATGTTGAAAT TCCAATTGAC ACTCATAGTG AAGCGTTTCG ATTAATAACG 
AGAATTCAAG ATGAGACCCA TCGTTTTGCA ATTGAGTATC ATCGCTCCCT ACGTTCTAAG 
GCGCAAGTAC ATTCCATTCT TGATGATATC GATGGTGTTG GTCAGACGAG AAGAAGAGCA 
CTTATGAAAC ATTTTGCATC CATAGATGCG ATCAAAGCGG CAAGCATGGA GGATTTAATG 
GCGGTACCAT CGATGAACAA GCTTTCCGCA GCGAAAGTAT ATGAGTTCTT TCATACTTCT 
TCCGAGAGAG GGACTGAGAC CACATAA 

 

Protein sequence

MFDLDEELKK LPAKPGVYIM HNNKDEIIYV GKAISLKNRV RQYFQSSRNL STKIQQMVSN 
IDHFEYIIVD SEMEALVLEC NLIKEHRPKY NTMLKDDKSY PYIKVTVNEA YPRVLFARQQ 
KKDKAKYFGP YTSLGAVKDI LDLLRRLYFI RTCNRNLPKD IGLERPCLYY HIKQCKAPCQ 
GYISEEEYRK SIDEVIEFLN GNYALVTKDL QAKMKAASEN LEFEEAAGYR DLILSVEKLS 
QKQKASDVDG VDRDIIAFAS TGDEAVAQVF FIRDGKMLGR EHYHITGVAN ESRSSIMTNF 
VKQFYAGTPY IPRELLLSEP LEEEELISEW LSTKRGQKVR IHVPKKGDKE RLVELAEKNA 
SLVLQQDSDK IQREEAKTIG AVRHIADMLS LPGIYRMESF DISNTNGFES VGSMVVYENG 
KPKRNDYRKF KIKSVQGPDD YASMREVLTR RFSHGQKEAE ELAKKNIDIS HGSFTRYPDL 
ILMDGGRGQV NIALEVMNEL KLTIPVCGMV KDDNHRTRGL YFDNVEIPID THSEAFRLIT 
RIQDETHRFA IEYHRSLRSK AQVHSILDDI DGVGQTRRRA LMKHFASIDA IKAASMEDLM 
AVPSMNKLSA AKVYEFFHTS SERGTETT