Gene Cphy_0313 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_0313 
Symbol 
ID5744236 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand+ 
Start bp391596 
End bp391976 
Gene Length381 bp 
Protein Length126 aa 
Translation table11 
GC content30% 
IMG OID641291403 
Productflagellar protein FliS 
Protein accessionYP_001557439 
Protein GI160878471 
COG category[N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1516] Flagellin-specific chaperone FliS 
TIGRFAM ID[TIGR00208] flagellar biosynthetic protein FliS 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTCAAA ATGCAGCAAG TATATATCAA GGAACTAAGA TAAATACTGC ATCACCAGCA 
GAGCTAACGT TAATGCTTTA TGAAGGTGCA ATTAAGTTTT GCAACAAGGC ATTATATGGT 
TTAGAACAAA ATGATATTGC GAAAGTAAAT GAAAATTTGT TGAAAGCTCA AAAAATTGTT 
ACTGAGCTTA GATCTACTTT AGATTTTAAG CATCCGATAG CAAGAGAATT TGACACTGTT 
TATGATTACA TTAATCGTAG ATTAGTTGAT GCTAATATTA AGAAAGATAC TGAGATATTA 
GAAGAAGCTC TTGACTATAT TCGTCAAATG AGGGATACAT GGAAAGAAGT AATGAAAAAA 
AATAATATAT ATGTTCAGTA A
 
Protein sequence
MAQNAASIYQ GTKINTASPA ELTLMLYEGA IKFCNKALYG LEQNDIAKVN ENLLKAQKIV 
TELRSTLDFK HPIAREFDTV YDYINRRLVD ANIKKDTEIL EEALDYIRQM RDTWKEVMKK 
NNIYVQ