Gene Cphy_0307 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_0307 
Symbol 
ID5744230 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp385771 
End bp387315 
Gene Length1545 bp 
Protein Length514 aa 
Translation table11 
GC content34% 
IMG OID641291397 
Productflagellar hook-associated protein 3 
Protein accessionYP_001557433 
Protein GI160878465 
COG category[N] Cell motility 
COG ID[COG1344] Flagellin and related hook-associated proteins 
TIGRFAM ID[TIGR02550] flagellar hook-associated protein 3 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGGTTA GTATGAGAAT TACAAATAAA ATGATGACAA ACAATGTTCT TTATAATATT 
AACAATAATA AGAACAGTTT GTCCAAAACA GAACAACAAT ACTCCACCGG TAAGAAGATA
CAGCGTCCTT CAGAAGACCC TATCGTTGCA GTACGTGCGT TGAAACTTCG TACCAATCTT
ACAGAACTAA ATCAATATTA TGAAAAGAAT ATTCCAGATG CCCTAGCGTG GATGGATTTG
ACAGAAAGTT CTTTAAGTAA CATTAATGAG ATTCTAACGA AGATACACAC ATATTGCGTG
AATGGTGCTA ATGATACCTT AACGGAAGAG GATAGAAACA GTCTTGCAGT TAATTTAAAT
CAATTAAAGG ACCAGATTTA TCAAGAAGGC AATACAAACT ATGCAGGGAG ATATGTTTTT
AGTGGATATA AGACGGATTC TAGTTTAGTT TTTTCTGAAA ATACATCAAA ATATAATTAT
TTATTAACAG AAAGATTAAG CGGAGCTAAC TTAGATGTCA TTCAAAAATC GATTAATTCC
TTTGATCTAT CTTCTTATAA TCCAAATGCA CCATGGGATA CTAGTTTTGA TGAAAAACCG
AATTATATCA CGGCACACCG TTTAAGATTA GCATATAACA ATCTCAAAAA CTTGGACGAT
GGACAATTAA AGATTGAGAT TGCCGACCAA GATTCCGATG GTAATGTAAT TCTTGACGGT
GATGGAAATA GAACGTATAC TGAATATAGT GGTATTATCG AATCGAGGTT ATCAACAGAT
GAAGACGCGT ATACTCCGCC AGATGGAACT ATTTATTTTC TAGCTGATAC TGGTGAATTG
ATTTTACCAG AGGATGTATA TCAAGATTTC CGTGATAAGG TTGATATTAA GGTTTCTTAC
GAGAAGAATT CTTTTGTGAA GAATGATTTA AAACCTGAAC ATTATTTTGA TTGCGTACAA
ACTGATTTAA CAAGCGATGA TCTTGTAGAG CGTAACTTTA CAAAACAGAA CCAGGAAATC
CGTTATGAGA TAAACTTTAG TCAATCAATG GTGGTGAATA CGCAAGGTAG TGATGCAATC
ACTCACAATA TAGGAAGAAC CATTGATGAT ATTATTTTTG CGGTAAACAG TGTTATTGCA
GTTGATAAAA AGATCTCTGA AGTTAATAAG ATGTTAGCAA GCGGAAATAT TACTGAAGAG
CAAAAAACAA CATTAAATCA GGCTTTAGAA GTATTAACGG CTGAGAAGAT TCTAAAAGAT
GAGGTAATGC AAAAAACATT TGGAAGTGCC CTCTCAGGAA TAAAAGAACA GCAAAATATT
ATCAATGTTG CAGTTTCTGA TTTAGGTAGC CGATCTGTTA GAATACAGCT TACAGAAAGT
CGTTTATCGA TGGAACAAGT TGATTTTGAG GATCTACTCT CAAAGAATGA GGATGCAGAT
ATAGTAGATA CGATAATCAA AATGAAATCA CAGGAATCTG TATATAATGC TTCTTTATCT
GCTGCTGCTA AGATTGTAAA GAATTCGTTA TTAGACTTCC TATAA
 
Protein sequence
MEVSMRITNK MMTNNVLYNI NNNKNSLSKT EQQYSTGKKI QRPSEDPIVA VRALKLRTNL 
TELNQYYEKN IPDALAWMDL TESSLSNINE ILTKIHTYCV NGANDTLTEE DRNSLAVNLN
QLKDQIYQEG NTNYAGRYVF SGYKTDSSLV FSENTSKYNY LLTERLSGAN LDVIQKSINS
FDLSSYNPNA PWDTSFDEKP NYITAHRLRL AYNNLKNLDD GQLKIEIADQ DSDGNVILDG
DGNRTYTEYS GIIESRLSTD EDAYTPPDGT IYFLADTGEL ILPEDVYQDF RDKVDIKVSY
EKNSFVKNDL KPEHYFDCVQ TDLTSDDLVE RNFTKQNQEI RYEINFSQSM VVNTQGSDAI
THNIGRTIDD IIFAVNSVIA VDKKISEVNK MLASGNITEE QKTTLNQALE VLTAEKILKD
EVMQKTFGSA LSGIKEQQNI INVAVSDLGS RSVRIQLTES RLSMEQVDFE DLLSKNEDAD
IVDTIIKMKS QESVYNASLS AAAKIVKNSL LDFL