Gene Cphy_0305 details

Gene Information

• Locus tag: Cphy_0305
• ID: 5744228
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium phytofermentans ISDg
• Kingdom: Bacteria
• Replicon accession: NC_010001
• Strand: +
• Start bp: 381918
• End bp: 383780
• Gene Length: 1863 bp
• Protein Length: 620 aa
• Translation table: 11
• GC content: 37%
• IMG OID: 641291395
• Product: flagellar hook-associated protein FlgK
• Protein accession: YP_001557431
• Protein GI: 160878463
• COG category: [N] Cell motility
• COG ID: [COG1256] Flagellar hook-associated protein
• TIGRFAM ID: [TIGR02492] flagellar hook-associated protein FlgK

Plasmid Coverage information

• Num covering plasmid clones: 35
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCTTAA TGAGTAGCTT ATATGTAGGT GTATCTGGAT TACAAGTCAG TCAAAATGGT 
CTGAATACCA CAGGACATAA TCTTGCAAAC GTAGAAACGG AAGGTTATGT TAGACAGCAA 
ACGGTATTAC AGACATCTCA ATATCGAACA ATAGGACAAT CGTATATTTC CCCAATGCAA 
TTAGGCCTTG GAGCAGAAAC AGCTGCTGTT CGTCAGGTTA GAGATATCTT TTTAGATAAA 
TCTTATCGAC AAGAGCTTGG GCGTCGAGGG TTCTATGATT CTCAGTATGA AACAGTATCC 
GAGATTGAAA ACTTAATGGG TGAGCTTGAG GGCGTTGCGT TCCAGGATTC TATTGCTGAC 
TTTTGGAAAA ACTTACAAGA ACTCGCGAAA GAACCGGATA GTTTAGTAAA GAGAGCTTCA 
CTTGTAGAAA CAAGTGTCGG CTTTGTTGAA CGCTCTGAGA ATTTATTCAA ACAGCTTCGG 
GACTATCAAT TAAATTTAAA TTTAAAAATA ACGAATACGA TCTCTCGTAT TAATGAAATT 
GGAGATCAAA TCTCGAGTTT AAATGATAGA ATTTGTGCTT ATGAAAGCAA TCGAGTAGAG 
CACGCGAACG ACTTAAGAGA CACGAGAAAT AAATTATTAG ATGAGTTGTC TCAAATGATT 
ACCATTACAT ATCGTGAAAA TGCAGATGGT AGAGTTACTG TAAATGCGGA AGGAGTTCCA 
TTTGTAACAG AAGATCTTAC ACATCATATG GGGAGCATGA CAGTAACACA AATCAGACAA 
CGACAGCTTG ACGAGGATGA ATTTAATTCA ACCGGTATGA TGGAAAATTC GGATATGTTA 
ATTCCGATTT GGCCAACGTA TGGTAATGTA GAAGTATTCA ATCGTGATTT GATACCAAAT 
CCAGTAGATA ATTCTGATAT TGGTTCTTTA AAAGGCTTGA TTTTAGCGAG AGGAACAAAA 
GTAGCAAAAG CTACGGATAT TCCGATCGCA CCTAATAAAG ATAATTACTT GGACGAGTTT 
GGCGACTTAA AGGAAGATGA ATATAATCTT GCATTAAAAG ATTATAAAGA GGCTGTTAAG 
ACATACAACA AAACAATAGA ACCATCCATT GTTATGTCAA CTCAGGCACA GTACGATCAG 
TTAATCCATG GTATTGTAAC AAAGATTAAT GACATCTTAT GCCCTAACAA AGAAGTAGTT 
ATCGCAGCAG GAACTACGAT TCAACTTTCA AATGGTGATA CGTATACTTA CGATAAGGAT 
ACGGTAATTA AGATTTTTGA TGATGAGAAT GCTCCAATTG GAATCAATGG TGAAGGTGGT 
ACGGAGTTAT TTAGTCGTAA ATCCATGCCT CGTTATATGG ATTACCAAGA GATTACTTTG 
GCTAATGGGG ATACCATTCT TGCTAAGATT TACAATGAGG AAGACGAGGC AAACAATTAT 
TCCTTGTATA CGGTTGGTGA ACTGGTAGTA AATCAGGAGA TGATTGAGGA TAAGTCAAAG 
ATTCCATTAA GCCAGAGTTC TAACACTGGA GATTATGATA TCAAGACTAC GGAGAGATTA 
TTAAAAGCAT GGCAGGAACC ATTTGCAACC CTTTCTCCAA ATACATTAAC AAAATCAAAC 
ATTAATGATT ATTACAATGC ATTAATCGGA GGTATAGCAA CTACCGGTGA GCGTTATCAT 
ACGATTGTTA AGAGTCAGGA AGGTATGGTA ACAAGCATTG ACAATCAGCG TCAATCAGTT 
CTTGGAGTAG CCTCTGACGA TGAACTTACA AGTTTAATTA AATTCCAACA TGCGTATAAC 
GCAGCTGCTA GATATATAAA CGTAATAGAT CAAATGCTTG AGCATATTGT AACGAGAATA 
TAG 

 

Protein sequence

MSLMSSLYVG VSGLQVSQNG LNTTGHNLAN VETEGYVRQQ TVLQTSQYRT IGQSYISPMQ 
LGLGAETAAV RQVRDIFLDK SYRQELGRRG FYDSQYETVS EIENLMGELE GVAFQDSIAD 
FWKNLQELAK EPDSLVKRAS LVETSVGFVE RSENLFKQLR DYQLNLNLKI TNTISRINEI 
GDQISSLNDR ICAYESNRVE HANDLRDTRN KLLDELSQMI TITYRENADG RVTVNAEGVP 
FVTEDLTHHM GSMTVTQIRQ RQLDEDEFNS TGMMENSDML IPIWPTYGNV EVFNRDLIPN 
PVDNSDIGSL KGLILARGTK VAKATDIPIA PNKDNYLDEF GDLKEDEYNL ALKDYKEAVK 
TYNKTIEPSI VMSTQAQYDQ LIHGIVTKIN DILCPNKEVV IAAGTTIQLS NGDTYTYDKD 
TVIKIFDDEN APIGINGEGG TELFSRKSMP RYMDYQEITL ANGDTILAKI YNEEDEANNY 
SLYTVGELVV NQEMIEDKSK IPLSQSSNTG DYDIKTTERL LKAWQEPFAT LSPNTLTKSN 
INDYYNALIG GIATTGERYH TIVKSQEGMV TSIDNQRQSV LGVASDDELT SLIKFQHAYN 
AAARYINVID QMLEHIVTRI