Gene Cphy_0299 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_0299 
Symbol 
ID5744222 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp375937 
End bp376965 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content38% 
IMG OID641291389 
Productglycosyl transferase family protein 
Protein accessionYP_001557425 
Protein GI160878457 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACGGT TAACGGCGGT TGTACCTTGT TTTAATGAAG AAGAAGTTCT TCCGATGTTT 
TATGAGGAAA TCATGAATGT TGCAGAATGT TTGAAGAATG AAGTTGAATT CGAGGTATTG
TTTGTTAATG ATGGTTCCAC CGATGGAACG TTACAGGAAA TCCGAAAATT AAGAGAGAGA
GACAAGCGGG TAAAGCTTGT CTCCTTCTCG CGTAATTTTG GTAAAGAAGC GGCAATGTAC
GCTGGCCTTG AACATTCAAC CGGTGATTTC GTAGCTATCT TGGATGCTGA TTTGCAGCAT
CCACCTAAGA TGTTAATTGA GATGTATCAT GGAATTGTCT TGGAAGGATA CGATAGTGTA
GCAGCAAAGC GTGTCACCAG AGATGGAGAA CCAAAGATCC GCTCTTTTTT CTCTAAAAAA
TTCTATAATA TCTTATGTAA GTTAAGTAAA ATAGAGATTG TCGAAGGTTC TGTAGATTAT
CGTCTTATGA CGAGACAGAT GGTGAAAGCT GTTCTATCCA TGAGTGAAAG GAATCGTTTT
ACGAAAGGAA TCTTTGGATG GGTAGGTTTT CATACCAAAT GGATTGCTTA TGAGAATGTA
GAGAGGGCAG CAGGGCAAAC CAAGTGGTCG TTCTGGAAAT TATTTAAATA CTCTCTGGAA
GGAATTATAG GATTTTCAAC AGCACCTCTT GCGATATCAT CTATACTTGG ACTTGCTTTT
TGTGGGTTTT CCGTTTTGGC TATCATTTAT ATTGTTATAA AAACAATAAT ATGGGGTGAT
CCAACAAGTG GTTGGCCATC CTTAGCTTGT ATTATCTTGA TGGTAGGCGG TATCCAATTA
TTCTGTATGG GTATTTTGGG ACAATATATG GGTAAAACTT ATATTGAGGT AAAAAATCGC
CCAATATATC TAGCAAGCCT TGTAGAGACA GAGGAAGAGC AAGACGATAG GATGTCGGAA
GCTAATCAAA AGCAAGATGA GATGTTGCCA GAAACTATAT CAAAAGCAAC AAATAAGGAA
ATAACGTAA
 
Protein sequence
MKRLTAVVPC FNEEEVLPMF YEEIMNVAEC LKNEVEFEVL FVNDGSTDGT LQEIRKLRER 
DKRVKLVSFS RNFGKEAAMY AGLEHSTGDF VAILDADLQH PPKMLIEMYH GIVLEGYDSV
AAKRVTRDGE PKIRSFFSKK FYNILCKLSK IEIVEGSVDY RLMTRQMVKA VLSMSERNRF
TKGIFGWVGF HTKWIAYENV ERAAGQTKWS FWKLFKYSLE GIIGFSTAPL AISSILGLAF
CGFSVLAIIY IVIKTIIWGD PTSGWPSLAC IILMVGGIQL FCMGILGQYM GKTYIEVKNR
PIYLASLVET EEEQDDRMSE ANQKQDEMLP ETISKATNKE IT