Gene Cphy_0255 details

Gene Information

• Locus tag: Cphy_0255
• ID: 5744178
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium phytofermentans ISDg
• Kingdom: Bacteria
• Replicon accession: NC_010001
• Strand: +
• Start bp: 314508
• End bp: 315044
• Gene Length: 537 bp
• Protein Length: 178 aa
• Translation table: 11
• GC content: 35%
• IMG OID: 641291345
• Product: sigma 54 modulation protein/ribosomal protein S30EA
• Protein accession: YP_001557381
• Protein GI: 160878413
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG1544] Ribosome-associated protein Y (PSrp-1)
• TIGRFAM ID: [TIGR00741] ribosomal subunit interface protein

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.000285504
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGTTATA TAATCAGCGG AAAGAATATT GATGTAACAG AGGGACTTAA GAGTGCGATC 
TATGAAAAGA TTGGCAAGTT GGAAAAGTAT TTTAATCCAG AGGCAGAAAT TCACGTTACA 
TTAAGTGTTG AAAAAGATCG ACAGAAAATC GAAGTTACTA TTCCTATGAA AGGTAATATC 
GTCAGAGCAG AACAAGTAAG CAATGATATG TATGCTTCCA TAGATCTTGT TGAGGAAGTA 
ATTGAGAGAC AACTTAAAAA GTATAAAAGT AAACTAAAAG ACATGAATCA GTCCGCGGCA 
AACTTTAATC CATCCTTTTT TGAAGATGTA CTAAATGAAG ATAGCGATGA AGAGGATATT 
AACATTACTC GTGTAAAGAG ATTTGCTATG AAGCCAATGG ATGCAGAAGA AGCTTGTGTG 
CAGATGGAGC TTCTTGGACA TAACTTCTAC GTGTTCCGTA ATGCGGAAAC TGATGAAGTG 
AATGTGGTTT ATAAGAGAAA AGGTAATTCT TACGGATTAA TAGAACCTGA ATTCTAA 

 

Protein sequence

MRYIISGKNI DVTEGLKSAI YEKIGKLEKY FNPEAEIHVT LSVEKDRQKI EVTIPMKGNI 
VRAEQVSNDM YASIDLVEEV IERQLKKYKS KLKDMNQSAA NFNPSFFEDV LNEDSDEEDI 
NITRVKRFAM KPMDAEEACV QMELLGHNFY VFRNAETDEV NVVYKRKGNS YGLIEPEF