Gene Cphy_0248 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_0248 
Symbol 
ID5745116 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp307688 
End bp308425 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content37% 
IMG OID641291338 
Productamidophosphoribosyltransferase 
Protein accessionYP_001557374 
Protein GI160878406 
COG category[R] General function prediction only 
COG ID[COG1040] Predicted amidophosphoribosyltransferases 
TIGRFAM ID[TIGR00201] comF family protein 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.067407 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTGGAGAA TGGTATGGAG AGAAATATTG GATGCTGTTT ATCCAAAGCG ATGTCCGATT 
TGTAATGAGA TTTTAGTTCC GAAGGATCGA AAGATATGCA GTATTTGCAG TGAGGAGCTT
CCTGTACTTA TGGAACCTCG CTGCAAAAAA TGCAGCAAAC CTGTTTTAGC AGAAGAACAA
GAATATTGTT TTGACTGTGT TAAGAAGCAG CATCATTATA CGAGAGGATT TGCTTGTTTT
CTTTACAATG AAAAATTAAA GAAATCTCTA AGTGAGTTTA AGTATCACGC AAAAAAAGAA
TATGCAGAGT TTTATGTAGA CTACATGGTA TCAAACCTTG GAGATTGGAT ATATAAAACG
AAGGCAGAAG TGCTAATACC GATTCCTTTA CATAAAAACA AATATAAGCA AAGAGGATTT
AATCAGGCTC AGTTGTTGGC CGAAGGACTA TCAAAGGCAC TTTCTATTCC AGTGGATACC
AAACTTCTGG TACGAACCAT GGATACAAAA CCACAAAAAA AGCTAGATAA CAAAGAACGA
ATGAAAAATC TGGAGAAGGC ATTCTCTGTT TCAACAAATG TCAAAAAGTC AGAGGAGTTG
TTCCCATACA AACGTGTGAT ACTAGTTGAT GATATCTACA CGACAGGAAG TACAATTGAA
GCGTGTACGA ATGTATTACA AAAGGCTGGA TGCCTTGAAG TATTCTTTGT TACGGTTTGT
ATAGGCAACG GATTCTGA
 
Protein sequence
MWRMVWREIL DAVYPKRCPI CNEILVPKDR KICSICSEEL PVLMEPRCKK CSKPVLAEEQ 
EYCFDCVKKQ HHYTRGFACF LYNEKLKKSL SEFKYHAKKE YAEFYVDYMV SNLGDWIYKT
KAEVLIPIPL HKNKYKQRGF NQAQLLAEGL SKALSIPVDT KLLVRTMDTK PQKKLDNKER
MKNLEKAFSV STNVKKSEEL FPYKRVILVD DIYTTGSTIE ACTNVLQKAG CLEVFFVTVC
IGNGF