Gene Cphy_0238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_0238 
Symbol 
ID5745106 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp295200 
End bp296393 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content42% 
IMG OID641291328 
Productelongation factor Tu 
Protein accessionYP_001557364 
Protein GI160878396 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0050] GTPases - translation elongation factors 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00485] translation elongation factor TU 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000602877 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTAAAG CTAAGTTTGA AAGAAACAAA CCACATTGTA ATATCGGAAC CATCGGTCAC 
GTAGATCATG GTAAAACAAC ATTAACAGCT GCTATCACAA AGACACTTCA TGACAGATTA
GGTACTGGTG AAGCAGTAGC ATTTGATAAG ATTGATAAGG CTCCAGAAGA AAGAGAAAGA
GGTATCACAA TTTCTACTTC TCACGTTGAG TATGAGTCAA AAGCTCGTCA CTATGCTCAC
GTTGACTGCC CAGGCCATGC TGACTATGTA AAGAACATGA TCACTGGTGC TGCTCAGATG
GACGGTGCTA TCCTTGTAGT TGCTGCTACT GATGGTGTTA TGGCTCAGAC TAAAGAGCAT
ATCTTACTTT CCCGTCAGGT TGGTGTTCCA TACATCGTTG TATTCATGAA CAAGTGTGAT
ATGGTTGATG ATCCAGAATT ACTTGAATTA GTAGAGATGG AAATCAGAGA ATTATTATCT
GAGTATGAGT TCCCAGGAGA TGATACTCCA ATCATCCAGG GTTCTGCTCT TAGAGCTCTT
GAAGATCCAA ACAGCCAATG GGGTGACAAG ATTCTTGAGT TATTCGACGC TGTTGATACC
TGGATTCCAG ATCCACAGAG AGCAACTGAT AAGCCTTTCT TAATGCCTAT CGAGGACGTA
TTCTCCATTA CTGGACGTGG TACTGTTGCT ACAGGCCGTG TTGAGCGTGG TGTTCTTCAT
GTATCTGAAG AAGTTGAAAT CGTTGGTGTT AAAGAAGAGA CTCGTAAGGT TGTTGTAACT
GGTATCGAGA TGTTCCGTAA ACTTCTTGAT GAGGCTCAGG CTGGTGATAA CATCGGTGCA
CTTTTACGTG GTGTTCAGAG AACAGATATC GAAAGAGGTC AGGTTCTTTG TAAACCAGGT
ACAATCAAGT GCTACAAGAA ATTCACAGCT CAGGTTTACG TATTAACAAA AGACGAAGGT
GGACGTCATA CTCCATTCTT CAATAACTAT AGACCACAGT TCTACTTCAG AACAACTGAC
GTTACTGGTG TTTGTAACTT ACCAGAAGGC GTAGAGATGT GTATGCCTGG AGATAACATC
GAAATGAATA TCGAATTAAT TCACCCAATC GCTATGGAGC AGGGTCTTGG ATTCGCTATC
CGTGAAGGTG GACGTACTGT AGGATCAGGT AAGGTTGCTA CAATTATCGG CTAA
 
Protein sequence
MGKAKFERNK PHCNIGTIGH VDHGKTTLTA AITKTLHDRL GTGEAVAFDK IDKAPEERER 
GITISTSHVE YESKARHYAH VDCPGHADYV KNMITGAAQM DGAILVVAAT DGVMAQTKEH
ILLSRQVGVP YIVVFMNKCD MVDDPELLEL VEMEIRELLS EYEFPGDDTP IIQGSALRAL
EDPNSQWGDK ILELFDAVDT WIPDPQRATD KPFLMPIEDV FSITGRGTVA TGRVERGVLH
VSEEVEIVGV KEETRKVVVT GIEMFRKLLD EAQAGDNIGA LLRGVQRTDI ERGQVLCKPG
TIKCYKKFTA QVYVLTKDEG GRHTPFFNNY RPQFYFRTTD VTGVCNLPEG VEMCMPGDNI
EMNIELIHPI AMEQGLGFAI REGGRTVGSG KVATIIG