Gene Cphy_0235 details

Gene Information

• Locus tag: Cphy_0235
• Symbol: rpsL
• ID: 5745103
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium phytofermentans ISDg
• Kingdom: Bacteria
• Replicon accession: NC_010001
• Strand: +
• Start bp: 291402
• End bp: 291824
• Gene Length: 423 bp
• Protein Length: 140 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 641291325
• Product: 30S ribosomal protein S12
• Protein accession: YP_001557361
• Protein GI: 160878393
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0048] Ribosomal protein S12
• TIGRFAM ID: [TIGR00981] ribosomal protein S12, bacterial/organelle

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 0.0000000000397858
• Plasmid hitchhiking: No
• Plasmid clonability: unclonable

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCAACAT TCAACCAGTT AGTAAGAAAA GGCAGAAAGA CTATGGAGAA GAATTCTCAG 
GCTCCAGCGT TACAAAAAGG ATTTAACTCC TTAAGAAAGA AAACGACAGA TGCATCCGCT 
CCACAAAAGA GAGGTGTGTG TACTGCAGTT AGAACGGCTA CACCTAAGAA GCCTAACTCA 
GCGCTTAGAA AGATTGCCAG AGTTCGTTTA AGTAACGGAA TTGAAGTAAC AAGCTATATC 
CCAGGTGAAG GCCACAACCT TCAGGAGCAT AGTGTTGTTC TGATCAGAGG TGGTAGAGTA 
AAGGACCTTC CAGGTACAAG ATATCATATC GTCAGAGGTA CACTTGATAC AGCAGGTGTT 
GCAAAGAGAA GACAGGCTCG TTCCAAATAC GGAGCTAAGA GACCTAAAGA AGCAAAGAAA 
TAA 

 

Protein sequence

MPTFNQLVRK GRKTMEKNSQ APALQKGFNS LRKKTTDASA PQKRGVCTAV RTATPKKPNS 
ALRKIARVRL SNGIEVTSYI PGEGHNLQEH SVVLIRGGRV KDLPGTRYHI VRGTLDTAGV 
AKRRQARSKY GAKRPKEAKK