| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_0229 |
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| Symbol | |
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| ID | 5745097 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | + |
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| Start bp | 284607 |
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| End bp | 285221 |
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| Gene Length | 615 bp |
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| Protein Length | 204 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 641291319 |
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| Product | ECF subfamily RNA polymerase sigma-24 factor |
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| Protein accession | YP_001557355 |
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| Protein GI | 160878387 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0753334 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAATG CGGACAATTT CTCCTCAGTG GGGAAGGATA TATCTTCCAA AGAGGGAGTT
CAATCGGAAC AAGATAAGAT AATCTATCAA AATTTTTTAG ATGGCGATAT GGAAGCCTTT
GAAGAACTGG TTATTAAACA TAAAGATCGT TTAATCTATT TCATACAGCG CTTGGTAAAT
AATTTGACAA TAGCGGAGGA TTTGGCACAG GACGCTTTTG TGGAAGTATT AGTTCATAAA
GAACGGTATC ATTTTCAGGT GAGTTTTAAA ACATATTTGT TTACGATTGG GCGAAATAAA
GCTATAGACT ATATACGAAA GAATAAACGG ATGATGTTGG TGGAAGATTA TCCGGAAAGT
TATGATGAAG AAAATCGAAT GGAAGAAAAT ATAATTCGAA AAGAAGAGAG TAAACTTTTA
TATGATGCCA TGAAGAAATT AAAGCCAGAT TATAAAGCAG CTATTTCACT CATTGATTTA
GAGCAAATGT CTTATGCAGA GGCTGCCAAG GTTTTAAAGA AAAGTGATGC ACAGATGAAA
GTTTTAATCT ATAGAGCTAG AAAAAGTCTT GCAAAGTTAA TGGAAAAGGA GGGCTACTCC
TATGAAAACA AATAG
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| Protein sequence | MNNADNFSSV GKDISSKEGV QSEQDKIIYQ NFLDGDMEAF EELVIKHKDR LIYFIQRLVN
NLTIAEDLAQ DAFVEVLVHK ERYHFQVSFK TYLFTIGRNK AIDYIRKNKR MMLVEDYPES
YDEENRMEEN IIRKEESKLL YDAMKKLKPD YKAAISLIDL EQMSYAEAAK VLKKSDAQMK
VLIYRARKSL AKLMEKEGYS YENK
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