| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_0222 |
|---|
| Symbol | |
|---|
| ID | 5745090 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | + |
|---|
| Start bp | 273457 |
|---|
| End bp | 275457 |
|---|
| Gene Length | 2001 bp |
|---|
| Protein Length | 666 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 641291312 |
|---|
| Product | UvrD/REP helicase |
|---|
| Protein accession | YP_001557348 |
|---|
| Protein GI | 160878380 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.00000045018 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACAG TGAATGAAGC GCAGGAGAGA GCGATTAAAC ATCATAAAGG TCCCATGCTT
GTTCTAGCGG GACCCGGTTC TGGGAAGACC TTAGTGATCA TAAGAAGAAC GCAGTATCTT
ATAGAGCAGC ATGGTATTTC ACCAAATAAC ATTCTAGTAA TTACGTTTAC CAAAGCTGCT
GCTATGGAGA TGCAGGAACG CTTTGATAGG TTAATGGGAC AAGGAAGGTT TGGTGTTAAT
TTTGGAACCT TCCATGCAAT CTTTTTTAAG ATATTACGAT TTGCTTATAA CTACAGTGTT
TCTAATATAA TAACAGAAGA AGAGAGATAC CGCCTCTTAC GCGATATCAT CCAATCGATG
GAGCTTGAGA TAGAGGATGA GAAAGAATTT TTAGAAGGGA TTGGATCGGA AATCAGTTTA
GTTAAGGGAG AAAACATGGA TATTTCTCAT TACTACTCTA TGAATTGTTC CGAAGAGACT
TTTCAGGAAA TATACAAAGA ATATGATAAG AAGTTACGTC ATCAAAACAA GATTGATTTT
GATGATATGT TGCTTCTTTG TTATGAGTTA TTAATAGAAA GACCTGACAT ATTGTCCTTA
TGGCAACAGA AATATCAATA CATCCTTATT GATGAGTTTC AAGATATCAA TCGTATTCAA
TATGAAATTA TCAAGATGCT TGCGAAACCT AAAAACAATC TATTTATCGT GGGCGATGAT
GATCAGAGTA TCTACCGGTT TCGGGGTGCA AAGCCGGAGA TCATGTTATC CTTTGAAGAA
GAATATAAAG GAGTAAAGAA AGTCGTTTTA AATAAAAACT ACCGTTCCAA AGGGAATATT
ATTACAGGAG CACTTAAAGT TGTTGGTAAT AACAAAAAGA GATTTCCGAA AGAGATACAA
TCGATACATG AGCCAGGAAA TGAGATTAAT GTAAAATCAT TTTCCGATTT GCCAGCACAA
AATCAAGCGA TTCTTGAGGA GATTGATCAT TATCGTAAGA TGGGGATGCG CTATTCTCAA
ATTGCTGTCC TTTATCGAAC GAACACGCAA CCAGGTTCAC TCGTTACGAA GCTTATGGAG
TATAACATAC CATTTAAGAT GAGAGACAGC TTACCAAACA TCTATGAGCA CTGGATTGCT
AAGGATCTAA TTTGCTATAT TAAGTTATCC ATGGGAATTC GGGAGAGGGG TCTTTTTTTA
CAGGTAATGA ATCGACCAAA ACGGTATATT AGTAGAGAGG CATTAGAGCA GACAGATGTG
GATTTAAACA CAATAAGGGA ATTCTATATG GAAAAGCCTT ATGTTGTCGA ACGAATTGAT
AAATTAGTTT ACGATTTAAC ACTAATTCGT AGAACAAATC CATATGCAGC AATTAACTAT
ATCCGTAGGG CAGTAGGTTA TGATGATTAC TTAAAGGAAT ATGCGGCCTT TCGTAGAATA
AAGGTGGAAG AGCTCTATGA CATTTTATCC GAGCTTCAAG AAGAATCAAG AGAATATAAA
ACGCATGAGG AATGGTTAAA TCACATTGAT GAGTACAAAG ACGGACTAAA GGAACAGGCA
TTAAAACAGA ATCAAAAAGA TGTGGATGGC GTGATATTAA CTACGTTTCA TGCTTCCAAG
GGTTTGGAAT TTGATGTGGT TATCCTTATG GATGCAAATG AAGGAATAAC ACCTCATAAA
AAAGCAGTGG TACCAGAGGA TATGGAGGAA GAGAGAAGGA TGTTTTATGT CGCCATGACG
AGAGCAAAGA GTTTTCTTCA TATCTTTTAT GTGAAGCAAC GGTATAATAA AGAATTATCA
CCCTCCAGAT TTGTCGGGGA ATTACTTGTT AGTCCTATGG AATTAAGAGA AGGGATGAGG
ATTCATCATT CCATCTATGG AGAGGGAAGC ATTAAGAAAA TGGAAGAGAA TAAGTTAACA
ATACAATTTG ATAAGATTTT TCTTCCAAAG GTGCTAGACA TGGAATTTTG TATACGAAAT
CAAATGATCA AAGTGGTCTA G
|
|---|
| Protein sequence | MKTVNEAQER AIKHHKGPML VLAGPGSGKT LVIIRRTQYL IEQHGISPNN ILVITFTKAA
AMEMQERFDR LMGQGRFGVN FGTFHAIFFK ILRFAYNYSV SNIITEEERY RLLRDIIQSM
ELEIEDEKEF LEGIGSEISL VKGENMDISH YYSMNCSEET FQEIYKEYDK KLRHQNKIDF
DDMLLLCYEL LIERPDILSL WQQKYQYILI DEFQDINRIQ YEIIKMLAKP KNNLFIVGDD
DQSIYRFRGA KPEIMLSFEE EYKGVKKVVL NKNYRSKGNI ITGALKVVGN NKKRFPKEIQ
SIHEPGNEIN VKSFSDLPAQ NQAILEEIDH YRKMGMRYSQ IAVLYRTNTQ PGSLVTKLME
YNIPFKMRDS LPNIYEHWIA KDLICYIKLS MGIRERGLFL QVMNRPKRYI SREALEQTDV
DLNTIREFYM EKPYVVERID KLVYDLTLIR RTNPYAAINY IRRAVGYDDY LKEYAAFRRI
KVEELYDILS ELQEESREYK THEEWLNHID EYKDGLKEQA LKQNQKDVDG VILTTFHASK
GLEFDVVILM DANEGITPHK KAVVPEDMEE ERRMFYVAMT RAKSFLHIFY VKQRYNKELS
PSRFVGELLV SPMELREGMR IHHSIYGEGS IKKMEENKLT IQFDKIFLPK VLDMEFCIRN
QMIKVV
|
|---|
| |