Gene Cphy_0214 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_0214 
Symbol 
ID5745082 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp262958 
End bp263719 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content40% 
IMG OID641291304 
Productelectron transport complex, RnfABCDGE type, E subunit 
Protein accessionYP_001557340 
Protein GI160878372 
COG category[C] Energy production and conversion 
COG ID[COG4660] Predicted NADH:ubiquinone oxidoreductase, subunit RnfE 
TIGRFAM ID[TIGR01948] electron transport complex, RnfABCDGE type, E subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000178696 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAAAG CGTTAGAGCG TATTTATAAC GGTGTAATTA AAGAAAATCC TACATTTGTC 
TTAATGCTTG GTATGTGTCC GACTCTTGCG GTTACAACTT CAGCAATCAA TGGTGTAGGT
ATGGGACTTA CGACAACAGC AGTTCTTATC ATGTCAAACA TGCTAATTTC TATGCTTCGT
AAGGCTATCC CTGATAAGGT AAGAATGCCA GCATTTATCG TAGTGGTAGC TTCCTTCGTA
ACTATTGTGC AGTTATTATT GCAGGCATAT CTTCCTTCAT TAAATGATTC CCTTGGTATC
TACATCCCAT TGATCGTTGT TAACTGTATT ATCCTAGGTA GAGCAGAGGC TTATGCATCA
AAGTATCCAG TATACCCATC TATCTTTGAT GGTGTAGGTA TGGGACTTGG ATTTACCGTT
GGTTTAACTT TAATTGGTTT ATTCCGTGAA ATACTTGGTG CAGGTACTGC GTTTGGTTTT
TCTATTATGC CAGATAGCTA TGAACCATTT TCTATCTTCG TATTAGCACC GGGTGCATTC
TTTGTCCTTG CGATGTTGAC AGCCCTTCAA AATAAGTTGA AGTTAAAATC TGCAACAAAT
GTTCCAATGG CTGACAAGCT TGCATGTGGC GGTAACTGCA GCAGTTGTAG CGGTAGTGCA
TGCCATAGCA ATCATGAGCT ACTTGATTCC GTAAAAGAAG AAGCAACTAA AAAAGCAGCA
GCTGAAAAGG CACGTGCAGC TAATCAGACA GAGAAGAAAT AG
 
Protein sequence
MSKALERIYN GVIKENPTFV LMLGMCPTLA VTTSAINGVG MGLTTTAVLI MSNMLISMLR 
KAIPDKVRMP AFIVVVASFV TIVQLLLQAY LPSLNDSLGI YIPLIVVNCI ILGRAEAYAS
KYPVYPSIFD GVGMGLGFTV GLTLIGLFRE ILGAGTAFGF SIMPDSYEPF SIFVLAPGAF
FVLAMLTALQ NKLKLKSATN VPMADKLACG GNCSSCSGSA CHSNHELLDS VKEEATKKAA
AEKARAANQT EKK