Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_0214 |
Symbol | |
ID | 5745082 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | + |
Start bp | 262958 |
End bp | 263719 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 641291304 |
Product | electron transport complex, RnfABCDGE type, E subunit |
Protein accession | YP_001557340 |
Protein GI | 160878372 |
COG category | [C] Energy production and conversion |
COG ID | [COG4660] Predicted NADH:ubiquinone oxidoreductase, subunit RnfE |
TIGRFAM ID | [TIGR01948] electron transport complex, RnfABCDGE type, E subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000000178696 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGTAAAG CGTTAGAGCG TATTTATAAC GGTGTAATTA AAGAAAATCC TACATTTGTC TTAATGCTTG GTATGTGTCC GACTCTTGCG GTTACAACTT CAGCAATCAA TGGTGTAGGT ATGGGACTTA CGACAACAGC AGTTCTTATC ATGTCAAACA TGCTAATTTC TATGCTTCGT AAGGCTATCC CTGATAAGGT AAGAATGCCA GCATTTATCG TAGTGGTAGC TTCCTTCGTA ACTATTGTGC AGTTATTATT GCAGGCATAT CTTCCTTCAT TAAATGATTC CCTTGGTATC TACATCCCAT TGATCGTTGT TAACTGTATT ATCCTAGGTA GAGCAGAGGC TTATGCATCA AAGTATCCAG TATACCCATC TATCTTTGAT GGTGTAGGTA TGGGACTTGG ATTTACCGTT GGTTTAACTT TAATTGGTTT ATTCCGTGAA ATACTTGGTG CAGGTACTGC GTTTGGTTTT TCTATTATGC CAGATAGCTA TGAACCATTT TCTATCTTCG TATTAGCACC GGGTGCATTC TTTGTCCTTG CGATGTTGAC AGCCCTTCAA AATAAGTTGA AGTTAAAATC TGCAACAAAT GTTCCAATGG CTGACAAGCT TGCATGTGGC GGTAACTGCA GCAGTTGTAG CGGTAGTGCA TGCCATAGCA ATCATGAGCT ACTTGATTCC GTAAAAGAAG AAGCAACTAA AAAAGCAGCA GCTGAAAAGG CACGTGCAGC TAATCAGACA GAGAAGAAAT AG
|
Protein sequence | MSKALERIYN GVIKENPTFV LMLGMCPTLA VTTSAINGVG MGLTTTAVLI MSNMLISMLR KAIPDKVRMP AFIVVVASFV TIVQLLLQAY LPSLNDSLGI YIPLIVVNCI ILGRAEAYAS KYPVYPSIFD GVGMGLGFTV GLTLIGLFRE ILGAGTAFGF SIMPDSYEPF SIFVLAPGAF FVLAMLTALQ NKLKLKSATN VPMADKLACG GNCSSCSGSA CHSNHELLDS VKEEATKKAA AEKARAANQT EKK
|
| |