| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_0212 |
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| Symbol | |
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| ID | 5745080 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | + |
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| Start bp | 261309 |
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| End bp | 262319 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 641291302 |
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| Product | electron transport complex, RnfABCDGE type, D subunit |
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| Protein accession | YP_001557338 |
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| Protein GI | 160878370 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4658] Predicted NADH:ubiquinone oxidoreductase, subunit RnfD |
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| TIGRFAM ID | [TIGR01946] electron transport complex, RnfABCDGE type, D subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0013917 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAAGATA TGTATAATGT CTCTGCATCA CCGCACGTGC GTAGTGGTGT AACGACAGCT
CAGATTATGA GAGATGTTGC AATTGCGTTA ATGCCTGCTT GTTTATTTGG TATTTATCAA
TTCGGTTTCT CAGCATTTTT GGTATTATTA GTTTCGGTGA CATCCTGTGT GGTATCCGAG
TTTTTGTATG AAAGATTAAT GAAACACCCA TATCGTCCTT ATGAGTGTAG TGCTCTAGTT
ACCGGTCTAT TAATCGGTAT GAATATGCCT GCTACCATTC CAGTATGGAT TCCAATGGTT
GGTGGTGTAT TTGCAATTAT CGTAGTAAAA CAGTTATATG GTGGACTTGG ACAAAACTTT
ATGAATCCTG CTCTTGCAGC TAGATGTTTC TTATCCATCT GTTTTACTTC TCGTATGACA
ACATTTGCAG TAGATGCATT TACAAATTCA GGTACTTCAA GTAGAACATT ATATTTATTT
AACTATGGTT ATGCTGGATT AGATGGCGTC AGCGGTGCAA CTCCACTTGC AGCGATGAAA
GCTTCCGAGG CAGCTCCAAG TTTACTTGAT ATGTTCTTTG GTTTCCATGG TGGTGTGATT
GGTGAAACAA GTGCCATGAT GCTTTTAATC GGTGCATGCT ATTTATTATA CCGTAGAATT
ATTTCCTTAC GAATTCCATT GACATATATC GCAACATTTG CAGTATTTAT AATTTTATTT
AGCGGCAAAG GATTTGATGT AGAATATGTG TTAGCTCAGA TTCTTGGTGG TGGATTAATA
TTAGGTGCTT TCTTTATGGC AACTGATTAC GTGACCTGTC CAATTACGAA GTATGGTCAA
ATCCTCTTTG GTGTTTGTCT TGGCGCGTTA ACCGGATTAT TCCGTGTATT TGGTGGTTCC
GCAGAGGGTG TATCTTACGC TATTATCTTC TGTAACTTAT TGGTGCCGTT GATTGAAAAA
ATCACGATGC CAAGGGGCTT CGGAATGGGA GGTAAGAAAC TTGCAAAATA A
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| Protein sequence | MKDMYNVSAS PHVRSGVTTA QIMRDVAIAL MPACLFGIYQ FGFSAFLVLL VSVTSCVVSE
FLYERLMKHP YRPYECSALV TGLLIGMNMP ATIPVWIPMV GGVFAIIVVK QLYGGLGQNF
MNPALAARCF LSICFTSRMT TFAVDAFTNS GTSSRTLYLF NYGYAGLDGV SGATPLAAMK
ASEAAPSLLD MFFGFHGGVI GETSAMMLLI GACYLLYRRI ISLRIPLTYI ATFAVFIILF
SGKGFDVEYV LAQILGGGLI LGAFFMATDY VTCPITKYGQ ILFGVCLGAL TGLFRVFGGS
AEGVSYAIIF CNLLVPLIEK ITMPRGFGMG GKKLAK
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