Gene Cphy_0202 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_0202 
Symbol 
ID5745070 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand+ 
Start bp251342 
End bp252022 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content39% 
IMG OID641291292 
ProductMgtC/SapB transporter 
Protein accessionYP_001557328 
Protein GI160878360 
COG category[S] Function unknown 
COG ID[COG1285] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.000128946 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCATGC CGGAGTTATT AACAGAAGTT AATGTAGTAT CAACAACCGT CCGCCTGCTG 
TTAGCATTAG TTTGCGGTGG AATTCTTGGG ATTGAACGAG GACGGAAAAA ACGCCCGGCT 
GGTTTTCGAA CTTATATGTT GGTCTGTATA GGATCAACCT TAGTAATGAT TACGAGTCAA 
TACATCTGTT CACTGTATCA AAATTCTGAT CCTGCGCGTA TGAGCGCGCA GGTTATCAGT 
GGTATCGGTT TTCTTGGTGC AGGGACAATT ATCGTGACAG GTAGAAATAG AGTGATGGGG 
TTAACAACAG CTGCTGGACT TTGGGCATCA GCTTGTATTG GTCTTTCCAT CGGTATTGGT 
TTTTATTCTG GTGCTATTAT TGGTTGTATT CTCATTTTTT TTGTAATGTC AGTACTTCAT 
CGATTAGACG AGCGTGTGAT ATCCTCTGTA AAGATTATTA ATCTCTATGT AGAGTTATCA 
CAAATGAGTG ATGTCGGGCA TCTTATGAGA TTTGCAAAAG AGCAGGATTT AAAAGTAAAT 
GATGTTGAAT TTGTAAGAGG AAAATCAGCT TCAGGGCTAG CCTTAACACT TACGTTAAAA 
TTTCCGAAGT GTTATACGCA GATCGAAATT ATAGAGCTAT TCAGTACAAT TGAGGGAGTT 
ACTTATATGG AAGTAATCTA A
 
Protein sequence
MAMPELLTEV NVVSTTVRLL LALVCGGILG IERGRKKRPA GFRTYMLVCI GSTLVMITSQ 
YICSLYQNSD PARMSAQVIS GIGFLGAGTI IVTGRNRVMG LTTAAGLWAS ACIGLSIGIG 
FYSGAIIGCI LIFFVMSVLH RLDERVISSV KIINLYVELS QMSDVGHLMR FAKEQDLKVN 
DVEFVRGKSA SGLALTLTLK FPKCYTQIEI IELFSTIEGV TYMEVI