Gene Cphy_0201 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_0201 
Symbol 
ID5745069 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp249113 
End bp251323 
Gene Length2211 bp 
Protein Length736 aa 
Translation table11 
GC content36% 
IMG OID641291291 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_001557327 
Protein GI160878359 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00388216 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGAAAA AGAAGGGGAA TCAAGAAGAA TTTAAGGTAA AGCGATTAAA AAGACAATCG 
AAGAAGGAAG AAAACATTGA GAAGTTATAC AAGCTAAATA AAGAATTAAA GCAAGAGAAA
GAAATTAGAC AAGATAGGTA TTCAAAGAAA AGGGAGAAAA AAAGGATCTT TGGAATTCGC
TTAAGGTTAG CTTTGGCGTT TATGGTACCA ATCGCCTTCA TTATCATTCT AGGAATTACA
TCATATAATA AAGCGTCAGA AGCAATGTTA AAAAGCTATG AAGAATCATC CTTTCAAGCT
CTTAAGACTA CAACAAACTA TTTCGAATTA GCAATGCAAA CGGTAGAATT ACGTTTAAAT
CAGCTAAAAG GCTATGAGAA TTTAAAGAAT TACTATTCTG GTACATATAA AAGTGATCCA
ATAACGGAGA TGACTACATA TAAGAATCTT CAAGTGTATA TTGAAACAAC GACGTATTCG
GATAATGTTT TGGCTAACTT ATACGTATTT AGCAAACGTG GTAATAACTT AAGTAACTAC
GGGAGCATGG ATTTAAGTGG TGCAGAGTTG GTGGAGGCTT ATCTTGAAAC TGAAGAAGGA
AAAAGAGATG AAAAAGAGAA TGGAGCATAT TCTTGGTCTG GCAAGCATCA GTTTGTCGAT
GAGCATTTTG TGCAGGATAA GAGTAAAATT ACAATCCCAT ATGCTTTTTC CGTATCCTCA
GCCTTTTTTG GGAATGGATT TAAACAAATC GGTTATATGG TAGCAGATAT TAGGTTAGAC
TTATTTCAAA AGAAATTATC AGAGCTTGAA CTATCTGAAA ACTCTATCTT TGTAGCTATC
TCAAAGGATG GTTATGAAGT GCATAGTAAT GAGGCTGAGG GCGTTTTGAT TGCTGACAAA
TCGTTTTATA CCGATGCATT AGCAAGTTCA GAGCTAAGTG GAACTAGCTA TGTAGACTTT
AATGGTGAAA AGCACCTATT TTTATATTCG AAAGCTACGA AATCAGGAAT TACCGTATGC
GGGCTGGTTC CATACTCCTA TTTGATATCA CAAGCAAAGG CTATTAGAAC ATCAACTGTG
ATATATGTTC TTATAGCAGT GGTCAGTGCT TTGTTCATTG CAGTCATTAT GTCAACCGAT
ATGGGAAGTG CTATTAATAA AATTATTGTC GCACTAAAAA AGGCTTCGGA AGGAGACTTA
ACGGTATCTG TTAATTGCCA AAGAAAAGAT GAATTTGGTA TGTTAGCGGA TAGCGCTAAT
AATATGATCT CTAATGTAAA AGGGCTTATT GATAAAGCAC AGAAAGTAAA GGATACTATT
TCATTATCTA CGGATGAGGT ATCGGATTCT GCAAAGCAGC TTTTAATAGC GACTCAGAAT
ATTTCTACTT CGATTGAAGA AATTCGTCAA GGTATTGTAC AACAAGCGGA AGATTCTGAA
AAATGCCTTC GTCAATCAGA CGAATTAACA ACGAGAGTGA ATCAGGTATC CTATAATGTT
ACAACGATTG AAAAACTGAC AGAGGACTCT AAAGCGGTCG TACAGCAAGG ATTAGTTTCC
ATTGACATTT TGCGAGATAA GTCAGAAGAA ACAACTAAGA TAACAAATAA CATTATCGGG
GATATCGAAT CGTTAGAGGC AGAGAGCGAG TCCATTGGTA AGATTATTGG TGTTATTAAT
GATATTGCTG AGCAGACGAA TTTGCTATCT TTGAACGCGT CAATTGAAGC AGCTAGAGCA
GGGGATGCTG GTCGTGGATT TGCAGTCGTT GCAGATGAGA TAAGAAAACT TGCAGAACAA
TCAGTCAGGG CATCTGGTGA GATAGCAACT ATCATTAGTA GCATTCAAGG AAAAACGAAG
CTTACCGTAA CCACAGTTCA AAAGTCAGAG AATATTGTAA AATCTCAGGG AAATGCGTTA
TTAAATACCA TCGATTTATT CCAGAAAATT GATGCATCAG TTGGTATGAT TGCAAAAGAG
CTTACTGAAA TTACGTCTGG TATATCGGGG ATTAAAGTTG CTGAAAATAC TACATTAAAT
GCGATAGAGA GTATATCTGC GGTTTCGGAA GAAACAGCTG CATCCTCAGA AGAAGTAGAT
AGTGCGGCAA ATCGCCAAGT AGAATCGGTA TCGAAATTAA GAGAGGCAAC TTTGCATTTA
GAAGCAGAAA CGAAAGAATT GAATGAAGCG TTGAATCAAT TTCGTATATA A
 
Protein sequence
MMKKKGNQEE FKVKRLKRQS KKEENIEKLY KLNKELKQEK EIRQDRYSKK REKKRIFGIR 
LRLALAFMVP IAFIIILGIT SYNKASEAML KSYEESSFQA LKTTTNYFEL AMQTVELRLN
QLKGYENLKN YYSGTYKSDP ITEMTTYKNL QVYIETTTYS DNVLANLYVF SKRGNNLSNY
GSMDLSGAEL VEAYLETEEG KRDEKENGAY SWSGKHQFVD EHFVQDKSKI TIPYAFSVSS
AFFGNGFKQI GYMVADIRLD LFQKKLSELE LSENSIFVAI SKDGYEVHSN EAEGVLIADK
SFYTDALASS ELSGTSYVDF NGEKHLFLYS KATKSGITVC GLVPYSYLIS QAKAIRTSTV
IYVLIAVVSA LFIAVIMSTD MGSAINKIIV ALKKASEGDL TVSVNCQRKD EFGMLADSAN
NMISNVKGLI DKAQKVKDTI SLSTDEVSDS AKQLLIATQN ISTSIEEIRQ GIVQQAEDSE
KCLRQSDELT TRVNQVSYNV TTIEKLTEDS KAVVQQGLVS IDILRDKSEE TTKITNNIIG
DIESLEAESE SIGKIIGVIN DIAEQTNLLS LNASIEAARA GDAGRGFAVV ADEIRKLAEQ
SVRASGEIAT IISSIQGKTK LTVTTVQKSE NIVKSQGNAL LNTIDLFQKI DASVGMIAKE
LTEITSGISG IKVAENTTLN AIESISAVSE ETAASSEEVD SAANRQVESV SKLREATLHL
EAETKELNEA LNQFRI