Gene Cphy_0188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_0188 
Symbol 
ID5745056 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp232976 
End bp234154 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content40% 
IMG OID641291278 
Productamidohydrolase 
Protein accessionYP_001557314 
Protein GI160878346 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1228] Imidazolonepropionase and related amidohydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACTAT TAATTAAGAA CGGAATCATC TTAACGATGT CCGAAACAAA GTATCAACCC 
GGTGATTTAT TAATAGAGGA TGGAAAAATT AAAGAAATCG CCCCTACAAT CTCAATCAGT
GAGGATAATT CACTCATAAC CATACCTGCA ACAAACTGTA TTGTGATGCC AGGATTAATT
GAAGCGCATT GTCACGTCGG TATTTCTGAA GAAAAGAAAG GAAAAGAAGG AGACGACTCG
AACGAGACAA GCAATCCGGT CTCTCCATAT CTACGGGCAA TCGATGCTAT CAATCCGCTA
GATCCAGCTT TTCATGATGC CATACGAGCA GGTATTACGG GAATTATGGT TGGGCCAGGA
AGTACAAATG TCGTAGGTGG ACAATTTACT TTTTTAAAAA CAGCGGGTTC GAGATGCATT
GAGGATTTAG CTATCTTAAA TCCAGCAGCA ATGAAGGTTG CATTTGGTGA AAATCCAAAA
TCCTTTTATG GGGAACAAGC TATGATGCCA TTCACCCGAA TGGGTATTGC GTTCTTACTT
CGGGAAGAAT TATGGAAAGC TAAGCAGTAT CTTAAGAAAA AGAAGAAGGC TGAAGAAACT
TCAGAGGAAT TTGATGAGGA CTTTCGATTA GAGCCATGGA TACCCGTCTT AGAAAAAAAG
ATTCCTCTTA AAGCACATGT CCACCGTACC GATGACATCC TAACAGCGAT ACGTATTGCA
AAAGAGTTCG AATTGGATAT GACTTTAGAT CACTGTTCGG AAGGCCATCT CATCTCTGAG
GAAATCTTAG ACTCTGGTTT TCCCGCCATT GTTGGTCCCG ACCTTGCCTC CCGCAATAAA
ATTGAAGTAC AAAACATGGC ATTTAAGACA GCAGGTGAAC TTAGCAAAGC AGGTGTTTTA
GTTTCTATTA CAACTGATCA TCCAGTTAGT CTTATACAAA CCCTTCCTAT TTGCACTGGG
TTCGCTGTTA AGAATGGGCT ACCGATGGAG GACGGACTAA GAGCAATCAC AATAAACGCT
GCAAAAATAT GTAGAGTTGA CCATCGTATA GGGAGCCTGG AGGTTGGAAA AGATGCTGAC
ATCGCCATCT TTGATGGAAA CCCATTAGAA GTCTTTACAA ACTGTCTCTA TACCATTATC
GATGGTAAAA TTATTTATCA ATATCATAAA CCTAAATGA
 
Protein sequence
MKLLIKNGII LTMSETKYQP GDLLIEDGKI KEIAPTISIS EDNSLITIPA TNCIVMPGLI 
EAHCHVGISE EKKGKEGDDS NETSNPVSPY LRAIDAINPL DPAFHDAIRA GITGIMVGPG
STNVVGGQFT FLKTAGSRCI EDLAILNPAA MKVAFGENPK SFYGEQAMMP FTRMGIAFLL
REELWKAKQY LKKKKKAEET SEEFDEDFRL EPWIPVLEKK IPLKAHVHRT DDILTAIRIA
KEFELDMTLD HCSEGHLISE EILDSGFPAI VGPDLASRNK IEVQNMAFKT AGELSKAGVL
VSITTDHPVS LIQTLPICTG FAVKNGLPME DGLRAITINA AKICRVDHRI GSLEVGKDAD
IAIFDGNPLE VFTNCLYTII DGKIIYQYHK PK