Gene Cphy_0186 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_0186 
Symbol 
ID5745054 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp231295 
End bp232161 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content33% 
IMG OID641291276 
ProductABC transporter related 
Protein accessionYP_001557312 
Protein GI160878344 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGGAA TTACGATTGA ACAAGTGAGT AAAAGATTTG GAAATGTTGT TGCATTAGAT 
AACATCAACC TATCGCTTAA AGCCGGAAAA ATCTATGGCC TTCTTGGTAG AAATGGTGCT
GGTAAATCAA CATTATTAAA TGTAATAACC AACCGATTAT TTGCAGAAGA TGGAAAAGTA
GTAATTGACG GGGAGAATGC AACTGAAAAT GATGAGACAT TATCTAAGAT TTTTTATATG
AGTGAAGGTA ACTGTTATCC TGAAAACTAC ACAGTAAAAG ATGTTTTTCA AGCAGCGAAG
TTATTTTACG GTGAATTTGA TTTTGAATAT GCGAAGAGGC TTTGTAAAAA ATTTGATTTG
AACATTAAGA AGAAAATTAA GGGCTTATCA ACTGGGTATG GTTCAATTTA TAAAATTATC
ACAGCATTGT GTTTACCAGT ACCCTATCTA TTATTAGATG AACCTGTATT AGGACTGGAT
GCAAATCATC GAGAACTATT TTACCAACTA ATCTTAGAGG ATTATAACCG ATATGAAAGA
ACGATTATTA TCTCAACGCA TTTGATTGAG GAAGTGTCAG GACTAATTGA GGAAGTAATC
ATAATAAATA AGGGTAAGGT AATTCGACAG GAGTCATGCG AGGAAATATT AAGTTCTGGT
TATACAGTTT CCGGAAATGC AAAAGATATT GAACAGTTCA TTAAGGATAA GAATGTGTTA
AGTGAGACTA GTCTTGGTGG GCTTAGGAGT GTATGTATTC TCGGAAAGTT AAATCGTGCA
GAGATTCCAG ATACCTTAGA GATTACGAAG TTAGATCTTC AGAAATTATT TGTTAATCTT
ACAAGTGAAA AGGAGGAGAT GGAATAA
 
Protein sequence
MNGITIEQVS KRFGNVVALD NINLSLKAGK IYGLLGRNGA GKSTLLNVIT NRLFAEDGKV 
VIDGENATEN DETLSKIFYM SEGNCYPENY TVKDVFQAAK LFYGEFDFEY AKRLCKKFDL
NIKKKIKGLS TGYGSIYKII TALCLPVPYL LLDEPVLGLD ANHRELFYQL ILEDYNRYER
TIIISTHLIE EVSGLIEEVI IINKGKVIRQ ESCEEILSSG YTVSGNAKDI EQFIKDKNVL
SETSLGGLRS VCILGKLNRA EIPDTLEITK LDLQKLFVNL TSEKEEME