| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_0118 |
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| Symbol | |
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| ID | 5744268 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | + |
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| Start bp | 158002 |
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| End bp | 159138 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 641291206 |
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| Product | glycine betaine/L-proline ABC transporter, ATPase subunit |
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| Protein accession | YP_001557246 |
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| Protein GI | 160878278 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1125] ABC-type proline/glycine betaine transport systems, ATPase components |
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| TIGRFAM ID | [TIGR01186] glycine betaine/L-proline transport ATP binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.435278 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATTAAAT TTACTAACAT AACAAAAAGT TTTAAGTCTA ATAAAATACT AAAGGATGTT
ACTTTCAACA TTGATACTGG TAACTTAGTG GCAATCATTG GTGAAAGTGG TTGTGGAAAA
ACAACATTGC TAAAAATGAT AAATCGACTC ATCAAGCCAA CGAGTGGCTC TATTTCAATT
GATGGTGAAG ATATTCTATC TTTAGATGAG GTATCGTTAC GAAGGAAGAT TGGTTATGTA
ATTCAGCAAA CAGGATTATT TCCACATATG ACGATTAAAG AAAATATAGA GATTATACCA
AAGATTCTTA AAGTAGATTC TGCAGAAATT ATGGAAAATA CAAAGAAATT GATGAACATG
GTAGGCCTTG ATTATGAGAA TTTTATTGAC CGATATCCAT CAGAATTAAG TGGAGGACAG
CAGCAAAGAG TTGGTGTGGC GAGGGCCTTT GCTAATAACC CTGATATTAT ATTAATGGAT
GAGCCATTTT CTGCACTTGA TCCGATGACG AGGTCTGATC TACAAGATGA ATTAGTAGAA
TTACAATCTA AGTTAAAGAA AACGATAGTT TTTGTTACAC ATGATATGGA CGAAGCGATA
AAGATAGCAG ATAAGATATG TATTATGAGA GAAGGACGCG TACTTCAATA CGACACGCCA
GAAAATATCT TAAAAAATCC AGTTGATGAT TATGTCTCAA ACTTCGTAGG TAAAAACCGA
ATTTGGTCTT CTCCGGAATT TATCAAAGTG CATGACTTTA TGATGAATAA ACCAGTTACA
GCAACAAAAG ATCTCTCAAT TTTAAAATGT ATTGATAAAA TGCGCCAAAA AAAGGTTGAT
AGCCTTCTAA TTATTAATCC AGATAATCAT CATTTGCATG GCATTTTGAA AGCTAGCCAG
ATAAGGAGTA TTGGAGATAG GACACAATCT GCAGAAAACT TCATGGTTAC AGACTTCCCA
ACATTAAATC CCGATAATAC CATAGTTGAT GCATTAAAGT TAGTAACAGA ACAAAAAGTT
TCAACAATTC CAGTTACCAA AGAGGATGGA TATTTGGTTG GTTTAGTAAC TCGTGGTAAT
TTAGTTACCA CACTAAGTCA GCAGTACTAT AACGGTGATG AGGAGGTGGA TGTATGA
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| Protein sequence | MIKFTNITKS FKSNKILKDV TFNIDTGNLV AIIGESGCGK TTLLKMINRL IKPTSGSISI
DGEDILSLDE VSLRRKIGYV IQQTGLFPHM TIKENIEIIP KILKVDSAEI MENTKKLMNM
VGLDYENFID RYPSELSGGQ QQRVGVARAF ANNPDIILMD EPFSALDPMT RSDLQDELVE
LQSKLKKTIV FVTHDMDEAI KIADKICIMR EGRVLQYDTP ENILKNPVDD YVSNFVGKNR
IWSSPEFIKV HDFMMNKPVT ATKDLSILKC IDKMRQKKVD SLLIINPDNH HLHGILKASQ
IRSIGDRTQS AENFMVTDFP TLNPDNTIVD ALKLVTEQKV STIPVTKEDG YLVGLVTRGN
LVTTLSQQYY NGDEEVDV
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