| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_0107 |
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| Symbol | |
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| ID | 5744257 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | - |
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| Start bp | 143877 |
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| End bp | 145286 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 641291196 |
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| Product | UDP-N-acetylmuramate--alanine ligase |
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| Protein accession | YP_001557236 |
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| Protein GI | 160878268 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0773] UDP-N-acetylmuramate-alanine ligase |
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| TIGRFAM ID | [TIGR01081] UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase
[TIGR01082] UDP-N-acetylmuramate--alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.159002 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATCACA TTGACTTTAC CAAACCGATT CACGTACATT TTATCGGTAT CGGAGGCATT
AGTATGAGCG GCCTTGCTGA GCTACTACAT ACCAAAGGTT TCACCGTTAG CGGTTCAGAC
GCAAAGGACA GCAAGATTGT GGATCGATTA AGACATTTAG GCATTACCAT TTTTATTGGA
CAGAAGGCAG AAAATATCAC CGAGGATATC GACCTTGTAG TATATACTGC TGCAGTAAAA
TCTGATAATG TAGAATATCA AGCTGTTCAA AAGCATAACA TACCAATGCT TGACCGTGCT
GACTTCTTAG GTCAGGTAAT GCTACAATAT AAAAATGCCA TCGGTGTCTC CGGTACTCAT
GGAAAGACAA CAACAACTTC AATGGTTTCT TTAATGATGC TAGAAGGGAA TTTTGATCCA
ACCATATCAG TTGGTGGTAT TCTTGATAAT ATTGAAGGTA ATATTCGTAT TGGTCATTCC
GAAAATTTTA TTGTTGAATC CTGTGAATAT AAAAATAGCT TCTTAAGTTT TAATCCTGCA
CATGCTATTA TTCTTAATAT AGAGGCAGAG CATTTAGACT TCTTTAAAGA TATTGAAGAC
ATTAGAACTT CTTTTCATAC CTTTGCAAAA AAACTTCCTG ACTATGGAAA CTTAGTGGTC
TGGGGTGGAA TTGACCGTTA TGAGGAACTG ATAGAAGACC TCTCATGTAA CGTTATCACT
TATGGTATGT TTTCCTCAGA AGAAGAGCGA GAACAAAATA AAGATCGTTA TGATTATGCT
GCCTGCAATG TTACCAGCGA TGACTTTGGC CTTCGTAGCT ACGACTTATA TAAGCATGGT
AAGTTTGTAG ACCGTATTAA TCTGGCTGTA ATTGGTGATC ACAATGTATT AAACTCGTTA
GCAGCAATTT CTCTTGTAGA TACCCTTGGT GGTACTATGT CTGCAATTAA GAAGGCACTT
TTAGCTTATA AGGGAACCGA ACGACGCTTT GAGCGTAAGG GTGTACTAAA TGGAATTACA
ATTGTAGATG ATTATGCCCA CCATCCTTCG GAGATTAAAG CAACCTTAAT CGCTGCAGCA
TCCTATCCTC ATAAAGATAT TTGGTGTGTC TTCCAACCGC ACACTTACAC ACGAACAAAA
TCCTTTTTTC ATGATTTTAC AACAGCGCTT GCACTTGCTG ACAAAATAGT CCTTGCTGAT
ATCTATGCAG CAAGAGAAGA GAATCCAGGT GATATTTCAT CTAAGGATAT ACAAAACGAA
TTACTTAAAA TAGGGAAAGA AGCTTACTAT ATTTCAGATT TTGCAGAAAT AGAAAAATTT
TTATTAGAAC ATTGTACCAA CGGTGACTTG TTGATAACCA TGGGCGCCGG AGACGTTGTA
TCTATTGGAG AATCTCTACT TCAGAAATAG
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| Protein sequence | MYHIDFTKPI HVHFIGIGGI SMSGLAELLH TKGFTVSGSD AKDSKIVDRL RHLGITIFIG
QKAENITEDI DLVVYTAAVK SDNVEYQAVQ KHNIPMLDRA DFLGQVMLQY KNAIGVSGTH
GKTTTTSMVS LMMLEGNFDP TISVGGILDN IEGNIRIGHS ENFIVESCEY KNSFLSFNPA
HAIILNIEAE HLDFFKDIED IRTSFHTFAK KLPDYGNLVV WGGIDRYEEL IEDLSCNVIT
YGMFSSEEER EQNKDRYDYA ACNVTSDDFG LRSYDLYKHG KFVDRINLAV IGDHNVLNSL
AAISLVDTLG GTMSAIKKAL LAYKGTERRF ERKGVLNGIT IVDDYAHHPS EIKATLIAAA
SYPHKDIWCV FQPHTYTRTK SFFHDFTTAL ALADKIVLAD IYAAREENPG DISSKDIQNE
LLKIGKEAYY ISDFAEIEKF LLEHCTNGDL LITMGAGDVV SIGESLLQK
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