| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_0106 |
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| Symbol | |
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| ID | 5744256 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | - |
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| Start bp | 142366 |
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| End bp | 143478 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 641291195 |
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| Product | primosome, DnaD subunit |
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| Protein accession | YP_001557235 |
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| Protein GI | 160878267 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3935] Putative primosome component and related proteins |
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| TIGRFAM ID | [TIGR01446] DnaD and phage-associated domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAAAA TTTCTTTCTT TTCAACCACA GATGCAGGAA TCACTGTAAT TTCCAATAGA
TTTTTAGATG AATACATGCC ACGTGCCAAT GGTACCTTCG TAAAAATATA TCTCTATCTA
CTTCGTTGTT TTCAGGATCC TTCCTTAGAA ACTTCACTTT CTTACTTGGC TGAAAAATTA
GATGAGACCG AAAAGGATAT TGAACGTGCA ATCCGTTATT GGGAAAAGGA GCAATTGCTT
ATTATAACTA GGGCAGCAAA TCGTCAAATA ACTGCTATAA CATTTACTTT TCCATCCAAC
GATAATCTAA ATACAGAGGA AACTTTGCCT TCTATCACAC AAGAGGTTAT GGAGCAGACA
GCAGTAACAG AGGCAGCAGC GAAAGAACAG GATAATTCAA AAGCAACTAC CATTCATAAA
CCAAACTACT CCGAGGCACA GATCAAAGCG CTTACTGAGA TGGAAGAAGT GAAGTGGATT
ATGAATACAG TAGAACGATT GTTAGAGCGT TTATTAAAAT CAACTGACGT TCAATTAATT
CTGTTTTTAT ATGAAAGCGT TGGATTTTCC GCTGAATTAA TCTTTTATCT CTATGAGTAC
TGCGTATCAA AGAATAAAAG GAGTGCAAGC TATATCGAGA CGGTAGCGAT TTCCTGGGCA
GAAGAAGGAA TTGACACTGT TGAAAAAGCT GATGCTGCAA CACTTTCTTA CAACAATAAT
TATAATTCCA TCAACAAGGC ATTTGGTTTA AATAGAGCTC CAGGAACTAT TGAAAAAAAG
TTTATGCATC GTTGGTTTCA TGAGTTTTGC TTTGATATTA ATATTATAGA GGAAGCTTGT
AATCGTACCA TGTTAGCAAC AGGGAAACCA GACTTTAAAT ATGCTGACAA AATACTTGAG
AACTGGTATA AAAAGGGAGT CACCTGCGAC GCTGATATTG TAAAATTAGA TGAAGCACAT
GCAAAACAAT CCGCCCTTTC CGCAGCGAAT AAACAAGCTG CATCCACAAA ACAACCTACT
GCAAACAACC GATTTAATGC ATTTCCTCAA AGAAAGTACT CCGAAGAGGA TTTTCTCTCA
ATGGAGCAAC GTCTTTTAAA TAATCGTTCA TAA
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| Protein sequence | MSKISFFSTT DAGITVISNR FLDEYMPRAN GTFVKIYLYL LRCFQDPSLE TSLSYLAEKL
DETEKDIERA IRYWEKEQLL IITRAANRQI TAITFTFPSN DNLNTEETLP SITQEVMEQT
AVTEAAAKEQ DNSKATTIHK PNYSEAQIKA LTEMEEVKWI MNTVERLLER LLKSTDVQLI
LFLYESVGFS AELIFYLYEY CVSKNKRSAS YIETVAISWA EEGIDTVEKA DAATLSYNNN
YNSINKAFGL NRAPGTIEKK FMHRWFHEFC FDINIIEEAC NRTMLATGKP DFKYADKILE
NWYKKGVTCD ADIVKLDEAH AKQSALSAAN KQAASTKQPT ANNRFNAFPQ RKYSEEDFLS
MEQRLLNNRS
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