| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_0095 |
|---|
| Symbol | asnC |
|---|
| ID | 5745022 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | + |
|---|
| Start bp | 126311 |
|---|
| End bp | 127729 |
|---|
| Gene Length | 1419 bp |
|---|
| Protein Length | 472 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 641291184 |
|---|
| Product | asparaginyl-tRNA synthetase |
|---|
| Protein accession | YP_001557224 |
|---|
| Protein GI | 160878256 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0017] Aspartyl/asparaginyl-tRNA synthetases |
|---|
| TIGRFAM ID | [TIGR00457] asparaginyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.113003 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGATATA GGAAAGGAGA AATAGGGATG GAACTTGTAC AAGTAAGAGA ACTGTTTCGT
AATAAGGAAC AATATCTAGG AAAGAAAATA ACAGTCGGTG GCTGGGTACG TAGTGTCAGA
GACACAAAGA CCTTTGGCTT TATCGTAATG AGCGATGGTA CTTTTTTTGA AACATTACAG
ATTGTTTATA CTGACAAGCT AAGCAATTTT GCAGAAATCT CTAAATTCAA TGTAGGTTCT
GCAGTTGTTG TAACCGGTAC GCTTGTTGCT ACTCCAGATG CAAAACAGCC ATTTGAGATT
CAAGCAGAGG AGGTACTTTT AGAGGGAGCT TCTACTTCTG ATTACCCACT TCAAAAGAAA
AGACACTCCT TAGAATTTTT AAGAGCAATG ACACATCTTC GCCCAAGAAC AAATACTTTC
CAAGCGGTAT TTCGTGTTCG TTCTTTAGTT GCTTATGCAA TTCATAAGTT TTTCCAAGAG
AGAGATTTCG TTTATGTTCA TACACCATTA ATTACTGGAA GTGATTGCGA GGGTGCTGGA
GAGATGTTCC AGGTAACTAC TCTTGATTTA AACAACATTC CAAAGACAAA AGAGGGTCAG
GTCGATTTTG ACCAAGATTT CTTTAATAAG CCAACCAACT TAACAGTTAG TGGACAGTTA
AATGGCGAGA CTTATGCGAT GGCATTTAAA AACATCTATA CCTTCGGACC AACCTTCCGT
GCAGAAAATT CGAATACCAC AAGACATGCT GCAGAATTCT GGATGATTGA GCCAGAAATT
GCTTTTGCTG ACTTAAAGGA TGATATGATT TTAGCAGAGT CTATGCTTAA ATATGTAATT
AAGTATGTAT TAGAGCATGC ACCAGAAGAG ATGGAGTTCT TTAACTCATT TGTAGATCAA
GGTTTACTTG AGAGATTACA GCATGTTGCT AACTCAGATT TTGGTCATGT AACATATACT
GAGGCAATTG AAATCTTAGA GAAGAATAAC GATAAGTTTG AGTACAAGGT TTCCTGGGGA
TGTGACTTAC AAACAGAGCA TGAGCGCTTT TTAACAGAGC AGATATTTAA AAAGCCTGTT
TTCGTTACTG ATTATCCAAA GGAAATCAAA GCATTTTATA TGAAGTTAAA CGAAGATAAT
AAAACGGTTG CAGCGATGGA TCTTTTAGTT CCTGGCATCG GTGAAATTAT CGGCGGAAGT
CAGAGAGAGG ATGATTATGA CAAGTTAGTC GCAAAGATGA AGGAAAGCGA CTTAAACGAA
GAAGATTATG ATTTCTATCT CGACCTAAGA AAATATGGTT CTGCAAGACA CGCAGGATTC
GGTCTTGGTT TTGAGCGTTG CGTAATGTAT CTTACAGGTA TGGGTAACAT CCGTGATGTT
ATTCCATTCC CAAGAACAGT TAATAACTGC GATTTATAA
|
|---|
| Protein sequence | MGYRKGEIGM ELVQVRELFR NKEQYLGKKI TVGGWVRSVR DTKTFGFIVM SDGTFFETLQ
IVYTDKLSNF AEISKFNVGS AVVVTGTLVA TPDAKQPFEI QAEEVLLEGA STSDYPLQKK
RHSLEFLRAM THLRPRTNTF QAVFRVRSLV AYAIHKFFQE RDFVYVHTPL ITGSDCEGAG
EMFQVTTLDL NNIPKTKEGQ VDFDQDFFNK PTNLTVSGQL NGETYAMAFK NIYTFGPTFR
AENSNTTRHA AEFWMIEPEI AFADLKDDMI LAESMLKYVI KYVLEHAPEE MEFFNSFVDQ
GLLERLQHVA NSDFGHVTYT EAIEILEKNN DKFEYKVSWG CDLQTEHERF LTEQIFKKPV
FVTDYPKEIK AFYMKLNEDN KTVAAMDLLV PGIGEIIGGS QREDDYDKLV AKMKESDLNE
EDYDFYLDLR KYGSARHAGF GLGFERCVMY LTGMGNIRDV IPFPRTVNNC DL
|
|---|
| |