| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_0088 |
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| Symbol | |
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| ID | 5745015 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | - |
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| Start bp | 117158 |
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| End bp | 119044 |
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| Gene Length | 1887 bp |
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| Protein Length | 628 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 641291177 |
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| Product | NADH dehydrogenase (quinone) |
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| Protein accession | YP_001557217 |
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| Protein GI | 160878249 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit
[COG2221] Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits
[COG3411] Ferredoxin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.296083 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAATTA GAAGCAGAGA AGAATTGGAC GCCTTAAAAG TCCGCTATCA AAAGTCTTTT
AAAAGCCAAT ACAAACAGAT ACTAATCTGT GGTGGAACTG GCTGTGTAGC TGGTGGATCC
TTAAACATCT ATGCCAGACT AAAAGAACTA ATCGAGGAAA GTGGGCTTGA TGTTTCCGTA
TCCTTAGAGG ATGAGCCGCA TGAAGCTGTA GGTATAAAAA AGAGCGGATG CCATGGTTTT
TGTGAGATGG GACCTTTACT TCGTATCGAA CCGGCAGGAG TTCTCTACAT CAAGGTGAAA
GTAGAAGATT GTGAAGAAAT CGTAGAGCAA AGTATTATAA AAGATGGAGT TGTAGAAAGG
CTTCTGTATA AGGATAGCGA AGGTAACTCC TATAATAAAC AAGAAGACAT ACCTTTTTAT
AAACAGCAGA CGCGTGTCGC CCTAGAACAC TGCGGACATA TCAATGCAGA ATCAATTAAC
GAATACATAG CTATGGGAGG CTATCAAGCA GTAGCAAAAG CTCTCTTTGA TATGACCTCT
GAATCTATTG TAGATGAAAT TTCCGATTCC TATCTTCGTG GTCGTGGGGG CGGCGGGTTC
CCAACCGGAA AGAAGTGGGC ACAGGTACTT CGCCAGACCG AAGAAACCAA ATACGTGGTT
TGTAATGGTG ATGAAGGTGA CCCAGGTGCT TTTATGGACC GTAGTATGAT GGAGGGTGAT
CCTCATCGAA TGATAGAAGG TATGATAATC GCAGGAATTG CAACAAAAGC ACATTATGGT
TATATCTATG TTCGTGCAGA GTATCCACTT GCAGTACACC GTTTGGAGAC AGCAATCGAA
CAAGCAAGGA GCTTAGGATT ACTCGGGTGT AATATCTTAG GTTCTGGATT TTCCTTTGCT
TTAAAAATTA GCCAAGGAGC AGGTGCCTTT GTTTGTGGAG AAGGATCTGC CTTAACCGCT
TCCATCGAAG GTAACCGTGG AATGCCTAGA GTAAAGCCAC CTAGAACGGT AGAAAAGGGA
TTATTTGAGA AGCCTACCGT ATTAAATAAC GTAGAAACCT TCTGTAATGT GCCGTCTATC
ATCTTAAAAG GTGCAGACTG GTATAAGACT TATGGTTTAG AAAAAAATTA TGGAACAAAA
GCATTTGCCT TAACAGGTAA TGTTATGAAT ACCGGCTTAA TTGAAGTACC AATGGGTACT
ACCCTTCGTA AGGTTATCTA TGATATTGGT GGCGGTGTAA AGGGTGGTGA GTTTAAAGCG
GTACAAATTG GCGGTCCATC CGGTGGGTGT CTTGTATTAA ATGCAGAGAA TGACCATCTT
GACATGCCAC TTGATTTTGA CTCCTTAAAA AAAGTAGGTG CAATGATAGG TTCCGGTGGT
CTTGTTGTTA TGAATGATAA GAGCTGTATG GTGGAAGTCG CTAGGTTCTT CATGAACTTT
ACCCAGAACG AATCCTGTGG AAAATGTGTT CCATGCCGTG AAGGTACCAA ACGAATGTTA
GAACTCTTAA CTGATATTGT AGAGGGAAGA GGGACACTTG AGCACCTAGA TCTATTAGAA
GAATTAGCGG AAACCATTTC TGCTACTGCT CTTTGTGGTC TTGGTAAAAC AGCTGCATCT
CCTGTTGTTT CAACCATCAA GTACTTTAGA GACGAATACA TTGCCCATGT CGTTGATAAA
AAATGTCCTG CCGGTCAGTG TAAGGCATTA ATGACCTTAA AGATTATTCC TGAACTTTGT
AAAGGATGTA CGAAATGTGC TAGACTGTGC CCTGTTTCCG CAATCTCCGG TGAAGTTAAG
AAGCTTCATA GTATTGATAC AAAGAAGTGT ATCAAATGTG GAGCTTGTAA AGATAGCTGT
GGTTTCAAAG CAATCATTGA AGAGTAG
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| Protein sequence | MLIRSREELD ALKVRYQKSF KSQYKQILIC GGTGCVAGGS LNIYARLKEL IEESGLDVSV
SLEDEPHEAV GIKKSGCHGF CEMGPLLRIE PAGVLYIKVK VEDCEEIVEQ SIIKDGVVER
LLYKDSEGNS YNKQEDIPFY KQQTRVALEH CGHINAESIN EYIAMGGYQA VAKALFDMTS
ESIVDEISDS YLRGRGGGGF PTGKKWAQVL RQTEETKYVV CNGDEGDPGA FMDRSMMEGD
PHRMIEGMII AGIATKAHYG YIYVRAEYPL AVHRLETAIE QARSLGLLGC NILGSGFSFA
LKISQGAGAF VCGEGSALTA SIEGNRGMPR VKPPRTVEKG LFEKPTVLNN VETFCNVPSI
ILKGADWYKT YGLEKNYGTK AFALTGNVMN TGLIEVPMGT TLRKVIYDIG GGVKGGEFKA
VQIGGPSGGC LVLNAENDHL DMPLDFDSLK KVGAMIGSGG LVVMNDKSCM VEVARFFMNF
TQNESCGKCV PCREGTKRML ELLTDIVEGR GTLEHLDLLE ELAETISATA LCGLGKTAAS
PVVSTIKYFR DEYIAHVVDK KCPAGQCKAL MTLKIIPELC KGCTKCARLC PVSAISGEVK
KLHSIDTKKC IKCGACKDSC GFKAIIEE
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