Gene Cphy_0076 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_0076 
Symbol 
ID5745003 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp105399 
End bp106172 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content39% 
IMG OID641291165 
ProductABC transporter related 
Protein accessionYP_001557205 
Protein GI160878237 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATGAAA TTATTGTAAA ACTTGAGGGA TTAGCAAAAC GCTTTGATAC AAAAGTTGCT 
GTGGATTTTG TAAACCTGGA AATAAAAAAA GGTGAAATCT TTGGCCTTCT TGGACCAAAC
GGTGCAGGGA AAAGTACCAC TATGAATATG ATTTGTACTT TGGTGAAACC TACCTCCGGA
CAGATTGAAC TGTTTGGTAG TGATATAAAA AAAGAGGAGA GGAAGAGCTT ATCAAGAATA
GGGTATGTTC CGCAAGATTT GGCGATTCAT GAGGCCCTAA GGGCTTGGGA GAATGTAGAA
TTATTTGCCT CTTTATACGG CATAAAGGGA GAAGAATTAA AAAAAGCAGT GGACAATTCG
CTTGACTTCG TTGGTTTATC AGAGCATAGA AAGGGGCTTC CAAAAAACTT TTCTAGTGGT
ATGAAGAGAA GGTTAAACAT TGCCTGCGCA TTGGGGCATC ATCCAGAACT GCTTATATTA
GATGAACCTA CCGTAGGAAT TGACCCACAG TCTCGCAACT TTATACTAGA AAAGATAAAA
TATCTAAATA AAATGGGTGT TACAGTGCTC TATACAAGTC ATTATATGGA GGAGATTGAA
GCAATTTGTA CACGACTTGC TATTATGGAT AATGGAAAAG TGATTGCCTG CGGTACAAAA
GAGGAGTTGG TTCAGTTGGT TTCTGATGAT CCAATGAGTG AAATAAGCCT AGAGCAAATC
TTCTTAACAC TAACAGGGAA GAAGCTTCGG GATTATGCGG AAGGAGAAAT GTAA
 
Protein sequence
MDEIIVKLEG LAKRFDTKVA VDFVNLEIKK GEIFGLLGPN GAGKSTTMNM ICTLVKPTSG 
QIELFGSDIK KEERKSLSRI GYVPQDLAIH EALRAWENVE LFASLYGIKG EELKKAVDNS
LDFVGLSEHR KGLPKNFSSG MKRRLNIACA LGHHPELLIL DEPTVGIDPQ SRNFILEKIK
YLNKMGVTVL YTSHYMEEIE AICTRLAIMD NGKVIACGTK EELVQLVSDD PMSEISLEQI
FLTLTGKKLR DYAEGEM