Gene Cphy_0065 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_0065 
Symbol 
ID5744992 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp90930 
End bp91751 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content39% 
IMG OID641291154 
ProductXRE family transcriptional regulator 
Protein accessionYP_001557194 
Protein GI160878226 
COG category[K] Transcription 
COG ID[COG1476] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTTT GTGATAAATT AATAGAACTA AGGCGAGAGC GTGGCCTCTC CCAAGAGCAG 
TTAGCAGACC AGCTAGATGT ATCCAGACAG TCCGTAAGTA AATGGGAGTC TGATCAAACG
ATGCCTGAAC TTTCGAAATT AATAACACTA TCCGAAATCT TTGAGGTTTC CCTAGATTAT
TTAATGAGAG ATTACATTAT GGATCGTTCT GGCACAAGAG AAAAGAAAGA TAATACAGTA
GATGATAAAG ATATACCAAA TAGAGAAAAT CGTTATTCAT CACTGGAAAC CCAAATTAAT
GAGATAAATG ACTATATTAA GAGACCACGT GGCTTTGAGT ATAAAAGTAA AAAAACATTG
TTTGGTTTGC CGTTAATTCA TATCTGCTTT TTATACTCCA GACATCGAAT CAAAGTGGCG
AGGGGAATTA TCGCAATTGG AGCTATTTCT GTTGGAGTTT TTAGTATCGG CGTCCTCTCC
TTAGGTTTAT TTGCTCTAGG AGCCTTGGCA CTAGGCTTAC TTTCCTTTGG TGCGATTTCC
CTTGGCGCTA TTGCAGTTGG CTCTATTGCT ATCGGATACA TTTCCATCGG CGCCCTTTCC
ATTGGAGTTT ACTCCTTAGG CTCACTGGCT GTTGCTAAGG AAATAGCAGT CGGTGCAATG
GCTTCCGGTA ATCTAGCCAT AGGTGACGAA TCCTATGGAA CCTATTGCTA TTCTATCGAT
GCCATTCAAA CAAAGGCTAT GGCAAAGGAT ATTATCCTAA CCCATTATCC ATCAATACCT
AAATTTCTTC TAAAAATATT TACCTTGTTT TTTCACCCGT AA
 
Protein sequence
MKFCDKLIEL RRERGLSQEQ LADQLDVSRQ SVSKWESDQT MPELSKLITL SEIFEVSLDY 
LMRDYIMDRS GTREKKDNTV DDKDIPNREN RYSSLETQIN EINDYIKRPR GFEYKSKKTL
FGLPLIHICF LYSRHRIKVA RGIIAIGAIS VGVFSIGVLS LGLFALGALA LGLLSFGAIS
LGAIAVGSIA IGYISIGALS IGVYSLGSLA VAKEIAVGAM ASGNLAIGDE SYGTYCYSID
AIQTKAMAKD IILTHYPSIP KFLLKIFTLF FHP