Gene Cphy_0048 details

Gene Information

• Locus tag: Cphy_0048
• Symbol: recR
• ID: 5744968
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium phytofermentans ISDg
• Kingdom: Bacteria
• Replicon accession: NC_010001
• Strand: +
• Start bp: 66208
• End bp: 66804
• Gene Length: 597 bp
• Protein Length: 198 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 641291130
• Product: recombination protein RecR
• Protein accession: YP_001557177
• Protein GI: 160878209
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0353] Recombinational DNA repair protein (RecF pathway)
• TIGRFAM ID: [TIGR00615] recombination protein RecR

Plasmid Coverage information

• Num covering plasmid clones: 32
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGATTATT ATAGTACACA GATTAGTAAG TTGATTGAAG AGCTTGGTAG GTTACCTGGC 
ATTGGTGCGA AATCCGCACA AAGACTTGCA TTTCATATTA TTAATATGCC AAAGGAACAG 
GTAGAACATC TTGCAAAAAC GATGCTTGAT GCAAGAAGCA ACGTTAAATA TTGTAAAGTG 
TGCCAGACCT TAACAGACAA AGAGATTTGC CCTATTTGCT CTAGTGAGAA GAGAGATCAA 
AAGGTCATAA TGGTGGTGGA AAATACGAGA GACTTAGCAG CTTATGAAAA GACCGGCAAA 
TTTGATGGGG TCTACCATGT ATTACATGGA GCTATTTCTC CTATGCTCGG AATCGGGCCA 
CAGGATATTA AATTAAAGGA ATTAATGTTA CGTCTTCAAG GGGATGTAGA TGAAGTAATA 
ATAGCGACGA ACTCGAGTCT TGAGGGTGAG GCCACTGCGA TGTATATTAG TAAATTAATT 
AAGCCTGCTG GCATTAAAGT AAGCCGTATC GCAAGCGGTG TACCAGTAGG CGGTGACCTT 
GAATACATTG ATGAAGTAAC ATTACTTCGT GCGCTAGACG GAAGAATTCA GTTATAG 

 

Protein sequence

MDYYSTQISK LIEELGRLPG IGAKSAQRLA FHIINMPKEQ VEHLAKTMLD ARSNVKYCKV 
CQTLTDKEIC PICSSEKRDQ KVIMVVENTR DLAAYEKTGK FDGVYHVLHG AISPMLGIGP 
QDIKLKELML RLQGDVDEVI IATNSSLEGE ATAMYISKLI KPAGIKVSRI ASGVPVGGDL 
EYIDEVTLLR ALDGRIQL