| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_0036 |
|---|
| Symbol | |
|---|
| ID | 5744956 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | + |
|---|
| Start bp | 51273 |
|---|
| End bp | 53756 |
|---|
| Gene Length | 2484 bp |
|---|
| Protein Length | 827 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 641291118 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001557165 |
|---|
| Protein GI | 160878197 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGGAAGC AAAAAGCAAG TGGAGTAATA ACTATCTATC TGACCTTGAC ATTATCCATC
ATGATAACAC TCATTGTTAC AACCATCGAG ATGGCTCGTG TGTCTGCTGC AAAAGCATAT
AGTGAGCGAG TGTTACAGAC AGCGATGGAA TCAACCCTAT GTGATTATTA TTTACCTTTA
TTTGAGCGGT ATCATGTGTT TGGGCTAGAT ATCGGATATG GTAGCAGTAT AGCAGATAGT
AATTTATTAG TAGATGAAAT TAGAAAAGGA ATAGAAGTTA GTTTTCTTCC AACGAAAGAT
GACCCACTAT CTAACCTTCT ATTACAAAAT AAAACCTATC TCATATGTAA TCCAATGCTA
GAGGAACTTT CGGTGGAGAA TATCCACTAT ATCACGGACC TCGACGGTGA ATTTTTTCGA
AAGCAAGCAA CTTCTTATAT GAAATATCAA GCTGCAGCAG ATGGGTTAGA GTATTTATTG
GATTCGGCGC ATGCTTTAGA AAAAACAGAA AAGGCAAATC TAAAGTTTGA AGAAAAGATG
AAGGTAGAGC AGGAATTCAT GCTAATCGAT AAGGATATCT TAAAGTTGAT GGAACTCATT
GATGGGATAA AAATAAAAGA TAACCAAATC GAGTGTAAAA AAGGAAAGCC AAAAACATTA
GATTCTTTTA CAAAAAAGCT ACTTTCCACA GAGCCAACGA TGGAGAACAC GTTGATTAAC
CATTCCACAA TATTTGATTC GTTAAAGGGT AACTACCTCA ATTATCCAAA TCAATTGAAT
AGCTTAAAGG ATAGTGCACA GGATGTAATG GAGCGCTATC GTACTGCCTA TGAGAATGCA
GTTAGACAAC GTGAGGAGGC GCTTTTAAGC CTGCGTGCCG AAAGAGCAGA CATGATAAAA
GAATCAAAGG ACAAACCCTG TGATACCACG AAGATTGATG CAAGGATTAC GTCATTAGAA
CAATCTCCAA TTACAATAGA TATCTATGTA TTGGATAGTC TTATGGCAAG CTGTAATTCT
ATCAATCAGA AAATGAATAG TTTTCTTAAT ACATTAAAAG AGGTAAAAGA AAAAGCAAAT
CAGGCACTTT CCTTGGTACA AAAAATTAAA GAAGCTAGAT ATAAAGCACA AGATAGTAAG
AATAGTTTTT TAGACGGATT AAACAAGGCA AGAGAAGAAA TAGGAGATGC CTTATACGAA
GAATTATCAA AATCTTCAGA GGAGATGGAG AGGTATTCAA ATCCTGAAGA AAAAGGCATC
GGAATAATTA AAGACATCGT AAGTATGGAA GAAACCTTAA AACAAGATAT AAAAGTATTA
GATGAGGTAG AAAGATATCT ATTGCCTAAT ATGACCTATA CAGAAGAGGG ATATGCTGCA
TGGCTTTCAA AAGTTAACCT AATACATACT TCTTTGGATC ATTTTAAATT AGATGGGCTT
GCTTTTGATT ACAGTGGTGT TAATTTCTCG GAAGAAAAGA ATAGTATCTT AAAAGCTGGA
AAGTCCTTGA TATCGGATGG CTTACTAAAC TTAGTACTGG AAGATGTGAA TAGCATATCA
AAAGCGGAAT TATATCAGTT AGAATTACCT TCCTTTACAG CCAAGAAATC TCCAGAGAAG
AGTTCACAGG CTGAGAATAA TATTAAAAAC ATTATGAACA CTGAGGATAG AGAGGATATT
ACCACAACAG GGATAGGAAG TTACGGAACC GATGCACTTG GTAGTTTCGC AAATAGCTTG
GTAGAGGAAT TATTGTTTCA AGCATATGAA AATGAACACT GTACCTATTA TTTATCAGAA
GGCTATAAGC CTGGGCAGGT TCTACAATAT GAGCTTGAGT ATTTATTATA TGGGAATATG
AGTGACAAAG AAAATGTATC CTCATTTATC AATCGTTTAA TTTTAATACG TACCATTGGA
AATATGATTT CTGTATTAAC AGATGCAAAT AAGGTGAGAG AAGCAAGTGA ATTTGCTGCC
TTAGTTGTGG GATTTTCGGG GTTGCCTTTT TTAATCAGTG TCGTAAAGTA TGTAGTTTTA
TTTATCTGGG CATTAGAACA ATCTTTAGTT GAAACAGCAG CGATGCTTTT GGGTAAAAAT
GTCCCCATAT TTAGTATGAA AGACGACTTT GTAGTTGAAT TTAAGGATTT GGCAAACTTC
AATAAAGATG GAATCACAAA AAAGGCAAAA GATTATAAAA CAAAAGAAGG AATTTTAAGT
GTAGGTTACA AAGGATATCT TCAAATATCG TTATTTTTTT CAAATAAAAA TAATCAATAT
TACCGGATGA TGGACTTAAT ACAGGAAAAT TTTCGTTATG AATATGAAGA TACCTTTCGA
ATACGTAATT GTGTTGTAAG TTATCGTGCG GTGGCTAAGG TTAGCATGCC CGAACAGTTT
TTTTCACTTC CATTCGCTAT ACATCGTGAG GCTTTGTCCA TTCACGGTTA CCTATATTTG
GCCCAAAAAG CAGTCTCATA TTAA
|
|---|
| Protein sequence | MRKQKASGVI TIYLTLTLSI MITLIVTTIE MARVSAAKAY SERVLQTAME STLCDYYLPL
FERYHVFGLD IGYGSSIADS NLLVDEIRKG IEVSFLPTKD DPLSNLLLQN KTYLICNPML
EELSVENIHY ITDLDGEFFR KQATSYMKYQ AAADGLEYLL DSAHALEKTE KANLKFEEKM
KVEQEFMLID KDILKLMELI DGIKIKDNQI ECKKGKPKTL DSFTKKLLST EPTMENTLIN
HSTIFDSLKG NYLNYPNQLN SLKDSAQDVM ERYRTAYENA VRQREEALLS LRAERADMIK
ESKDKPCDTT KIDARITSLE QSPITIDIYV LDSLMASCNS INQKMNSFLN TLKEVKEKAN
QALSLVQKIK EARYKAQDSK NSFLDGLNKA REEIGDALYE ELSKSSEEME RYSNPEEKGI
GIIKDIVSME ETLKQDIKVL DEVERYLLPN MTYTEEGYAA WLSKVNLIHT SLDHFKLDGL
AFDYSGVNFS EEKNSILKAG KSLISDGLLN LVLEDVNSIS KAELYQLELP SFTAKKSPEK
SSQAENNIKN IMNTEDREDI TTTGIGSYGT DALGSFANSL VEELLFQAYE NEHCTYYLSE
GYKPGQVLQY ELEYLLYGNM SDKENVSSFI NRLILIRTIG NMISVLTDAN KVREASEFAA
LVVGFSGLPF LISVVKYVVL FIWALEQSLV ETAAMLLGKN VPIFSMKDDF VVEFKDLANF
NKDGITKKAK DYKTKEGILS VGYKGYLQIS LFFSNKNNQY YRMMDLIQEN FRYEYEDTFR
IRNCVVSYRA VAKVSMPEQF FSLPFAIHRE ALSIHGYLYL AQKAVSY
|
|---|
| |