| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_0032 |
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| Symbol | |
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| ID | 5744952 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | + |
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| Start bp | 47419 |
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| End bp | 48633 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 641291114 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_001557161 |
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| Protein GI | 160878193 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 57 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACAGA GGAAGCAAGA ATTACAAGAA CAAATTCTTG CGGGAATAGA TATGACAAGA
GAATTAACAG AAGAAGAATT ATTTGACCAT ATTGATGAAG CGATTAAGGT TCGTGGCAAA
GAAGAATACA TAAGTATTAC CGAAAAACAA CGACTTCGTA TAGAAATCTT TAATTCCATT
CGTAGGCTTG ATGTATTGCA GGAACTTGTT GAAGATACTT CCATTACAGA AATTATGATA
AATGGTGCGA AAGAAATATT CGTGGAGCGA GATGGAAAAC TGATGAAATG GGAGAAGGAG
TTTGAATCAG ATCGTAAGCT TGAGGATGTG ATTCAAACGA TTGTCGCAGG GGCGAACCGT
ATTATTAATG AAGCGAGCCC AATTGTGGAT GCAAGATTAA AGGATGGCTC CCGTGTCAAT
ATAGTACTTC CACCCATAGC AATCGGAGGA CCAACCGTTA CGATTCGTAA GTTCCCCAAG
GAAACAATGA CAATGGAAAA GCTGGTGACA ATTGGTTCCT TGACCGAAGA AGCTGCTGAG
TTTTTAAAGA AATTGGTGAT TGCAGGCTAT AATATCTTTG TTAGTGGAGG TACCGGTTCA
GGAAAAACAA CCTTCTTAAA TGCATTGTCA AACTACGTTC CCTCGGAAGA ACGAATCATT
ACCATCGAAG ACTCTGCAGA GCTGCAAATA CGTAATATTC CAAATTTAGT TCGCTTGGAG
GTAAGGAATG CAAACGTGGA GGGGAAGAAT GAAATCTCGA TTCGTGACTT AATCAAAAGC
AGTCTTCGTA TGAGGCCCGA CCGTATTATT GTCGGAGAAG TTCGAGATGC CTCCAGTATT
GATATGTTAC AAGCTCTCAA TACAGGACAT AACGGAATGA GTACAGGACA TTCCAATTCT
CCAACGGATA TGTTATCTCG ATTAGAAACC ATGGTTTTAC TTGGGGCGGA TATACCACTA
TTGGCTGTTA GAAAGCAAAT TGCATCCGCA ATTGATATTG TAATTCACCT TGGAAGACTT
CGAGACAAGA CGAGAAAAGT TTTAGAAGTC GTAGAGGTTT TAGAATGTGT GGATGGGGAA
ATCGAAGTGA ATCCGCTTTT CTTATTTTCA GAAGAAGGGG AAACGAAGGA GGGAAAAGTA
TTAGGAGAAC TAAAAAAGAC AGACAATTCA CTACTCCATG TACAAAAGTT ATTACGTGCA
GGGCTATCCT TATAA
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| Protein sequence | MEQRKQELQE QILAGIDMTR ELTEEELFDH IDEAIKVRGK EEYISITEKQ RLRIEIFNSI
RRLDVLQELV EDTSITEIMI NGAKEIFVER DGKLMKWEKE FESDRKLEDV IQTIVAGANR
IINEASPIVD ARLKDGSRVN IVLPPIAIGG PTVTIRKFPK ETMTMEKLVT IGSLTEEAAE
FLKKLVIAGY NIFVSGGTGS GKTTFLNALS NYVPSEERII TIEDSAELQI RNIPNLVRLE
VRNANVEGKN EISIRDLIKS SLRMRPDRII VGEVRDASSI DMLQALNTGH NGMSTGHSNS
PTDMLSRLET MVLLGADIPL LAVRKQIASA IDIVIHLGRL RDKTRKVLEV VEVLECVDGE
IEVNPLFLFS EEGETKEGKV LGELKKTDNS LLHVQKLLRA GLSL
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