| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_0025 |
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| Symbol | |
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| ID | 5744945 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | + |
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| Start bp | 40543 |
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| End bp | 42537 |
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| Gene Length | 1995 bp |
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| Protein Length | 664 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 641291108 |
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| Product | methionyl-tRNA synthetase |
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| Protein accession | YP_001557155 |
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| Protein GI | 160878187 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[R] General function prediction only |
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| COG ID | [COG0073] EMAP domain
[COG0143] Methionyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00398] methionyl-tRNA synthetase
[TIGR00399] methionyl-tRNA synthetase C-terminal region/beta chain |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0492884 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAAAA AGCCATATTA CATCACAACT GCAATTGCAT ATACATCAGG TAAGCCGCAC
ATTGGAAATA CCTATGAAAT CGTGCTTGCG GATAGTATTG CAAGATTTAA GAGATTGGAA
GGTTATGAGG TATTCTTCCA GACAGGAACC GATGAGCATG GACAAAAAAT TGAGGAAAAG
GCTGCAGAAG TAGGAGTTTC TCCAAAAGAG TTCGTAGATA AGGTAGCAGG TGGAATTAAA
GACATTTGGG ATTTAATGAA TTCTTCTTAT GATAAATTCA TTCGTACAAC CGACGTGGAT
CATGAAAAAC AGGTTCAGAA GATCTTTAAG AAGTTATATG ATCAGGGTGA TATCTACAAA
GGTAATTACG AAGGAATGTA TTGTACTCCA TGTGAGTCCT TCTTTACTGC TTCCCAGCTT
GTAAATGGAA AATGTCCTGA CTGTGGAAGA GAGTGTCAGC CAGCAAAAGA AGAAGCGTAT
TTTCTAAAGC TTAGCAACTA TACGGGGAGG TTAATTGATC ATATCAATAC ACATCCAGAG
TTTATTCAGC CAGAATCCAG AAAGAATGAG ATGATGAACA ACTTCTTATT ACCTGGATTA
CAGGATTTAT GTGTATCCAG AACCTCTTTC AAATGGGGTA TTCCAGTAGA CTTTGATCCG
AAACATGTTA TTTATGTATG GATTGATGCG TTAAGCAACT ATATCACTGG TATTGGTTAT
GACTGTGATG GAAATTCTAC TGAGCAGTTT AATAAGTTCT GGCCAGCGGA TTTACACTTG
ATTGGTAAGG ATATTTTACG TTTCCACACA ATTTATTGGC CAATCATGTT AATGGCACTT
GATTTACCAT TACCAAAGCA GGTATTTGGT CATCCTTGGT TATTACAGAC GGATCCAAAT
GCAAAAGACG GTTCTGGCGT GAAGATGAGT AAGTCCAGAG GTAACGTATT ATATGCCGAT
GATTTAGTTG AATTCTTTGG TGTAGATGCA GTTCGTTACT TCGTACTTCA TGAGATGCCA
TTTGACAATG ATGGTGTGAT TAACTGGGAG CTTATGGTAG ATCGTATGAA TTCCGATCTA
GCGAATACCT TAGGAAACTT AGTAAATCGT ACGATTTCAA TGTCAAATAA GTACTTTGAA
GGTGTTGTAA ATAAAACTGA CGTAACAGAG CCAGTAGATG CAGACCTAAT TGAAGTTGTA
ACAAAGACGA GAGATAAAGT GGTTGCAAAG ATGGCAAACC TTCGTGTTGC AGATGCAATT
TCTGAGATCT TTACGTTATT TAAGAGATGT AATAAATATA TTGATGAAAC GATGCCATGG
GCTCTTGCAA AAGAGGAAGA AAAGAAGGCT AGACTTGAAA ACGTATTATA TAACTTAGTT
GAGAGTATCT GTATTGGTGC TAATCTTTTA GAGCCATTCT TACCAGAATC CGCAGAGAAG
ATTTTAGCAC AGTTAAACGC TAAAAAGAGA AACATTGAGG AGCTTGCTAC ATTTGGATTA
TACGATAACG GTACGAAGGT TACAGATCAG CCACAGATCT TATTTGCTCG ACTTGATTTA
AAAGAAGTTT TAGCAAAGGT GGAAGAGAAA CATGCAAGCG AAGTAGAGGA GACAGCAAAA
GTGGAAGAAG TAAAACAAGA AGAAACTGTA ATTGAGATAC CAGCAAAAGA TGAAATTACC
TATGACGATT TTGCAAAACT GCAATTTCAA GTAGGTGAAA TTATTGCTTG TGAAGAAGTG
AAGAAATCAA AGAAACTTCT TTGTTCCCAA GTTAAAATTG GAAATCAAGT AAAACAGATT
GTATCTGGAA TCAAGGCTCA TTATACTGCA GAAGAAATGG TTGGTAAGAA GGTTATGGTT
TTAGTGAACT TAAAGCCAGC AACTTTAGCA GGCATCGTAT CAGAAGGTAT GTTATTATGT
GCTGAGGATG AAAATGGAGT ACTTGCATTA ATGACACCAG AAAAACCAAT GCCATCTGGA
GCAGAAATCT GCTAA
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| Protein sequence | MSKKPYYITT AIAYTSGKPH IGNTYEIVLA DSIARFKRLE GYEVFFQTGT DEHGQKIEEK
AAEVGVSPKE FVDKVAGGIK DIWDLMNSSY DKFIRTTDVD HEKQVQKIFK KLYDQGDIYK
GNYEGMYCTP CESFFTASQL VNGKCPDCGR ECQPAKEEAY FLKLSNYTGR LIDHINTHPE
FIQPESRKNE MMNNFLLPGL QDLCVSRTSF KWGIPVDFDP KHVIYVWIDA LSNYITGIGY
DCDGNSTEQF NKFWPADLHL IGKDILRFHT IYWPIMLMAL DLPLPKQVFG HPWLLQTDPN
AKDGSGVKMS KSRGNVLYAD DLVEFFGVDA VRYFVLHEMP FDNDGVINWE LMVDRMNSDL
ANTLGNLVNR TISMSNKYFE GVVNKTDVTE PVDADLIEVV TKTRDKVVAK MANLRVADAI
SEIFTLFKRC NKYIDETMPW ALAKEEEKKA RLENVLYNLV ESICIGANLL EPFLPESAEK
ILAQLNAKKR NIEELATFGL YDNGTKVTDQ PQILFARLDL KEVLAKVEEK HASEVEETAK
VEEVKQEETV IEIPAKDEIT YDDFAKLQFQ VGEIIACEEV KKSKKLLCSQ VKIGNQVKQI
VSGIKAHYTA EEMVGKKVMV LVNLKPATLA GIVSEGMLLC AEDENGVLAL MTPEKPMPSG
AEIC
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