Gene Cphy_0013 details

Gene Information

• Locus tag: Cphy_0013
• ID: 5744933
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium phytofermentans ISDg
• Kingdom: Bacteria
• Replicon accession: NC_010001
• Strand: +
• Start bp: 23329
• End bp: 23982
• Gene Length: 654 bp
• Protein Length: 217 aa
• Translation table: 11
• GC content: 35%
• IMG OID: 641291096
• Product: transaldolase
• Protein accession: YP_001557143
• Protein GI: 160878175
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG0176] Transaldolase
• TIGRFAM ID: [TIGR00875] fructose-6-phosphate aldolase, TalC/MipB family

Plasmid Coverage information

• Num covering plasmid clones: 34
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAATTTT TTATAGACAC AGCGAATGTT GAAGAAATCA AAAAAGCAAA TGACATGGGT 
GTTATTTGTG GTGTTACAAC AAATCCATCA TTAATCGCAA AAGAAGGTAG AGATTTTAAA 
GAAGTAATCA CTGAGATTAC TAATATTGTA GATGGTCCTA TTAGTGGTGA AGTAAAGGCT 
ACTACAGAAG ATGCAGAATC TATGATTAAA GAAGGACGCG AAATTGCAAA AATTCATCCT 
AATATGGTAG TTAAAATTCC TATGACAGTA GAAGGGTTAA AGGCGACTAA AGTGTTATCC 
CAAGAAGGAA TTAAAACCAA TGTTACTTTA GTATTTTCTG CAAATCAGGC ATTATTAGCT 
GCTAGAGCAG GAGCAACTTA TGTTTCTCCT TTCTTAGGTA GACTCGATGA TATTTCAACT 
CCAGGTATTG ATTTAATTCG TACAATCTCA GATATTTTCG AGATATATAA TTTACCAACT 
GAGATTATTG CTGCAAGTGT AAGAAATCCA GTTCATATTA CAGATTGTGC ATTGGCGGGG 
GCGCATATTG CTACCGTTCC ATATAGTGTT ATTGTTCAAT GTACTAAGCA TCCATTAACG 
GATGCTGGTA TTGAGAAGTT TAAAGCAGAC TATAGAGCTG TATTTGGCGA ATAA 

 

Protein sequence

MKFFIDTANV EEIKKANDMG VICGVTTNPS LIAKEGRDFK EVITEITNIV DGPISGEVKA 
TTEDAESMIK EGREIAKIHP NMVVKIPMTV EGLKATKVLS QEGIKTNVTL VFSANQALLA 
ARAGATYVSP FLGRLDDIST PGIDLIRTIS DIFEIYNLPT EIIAASVRNP VHITDCALAG 
AHIATVPYSV IVQCTKHPLT DAGIEKFKAD YRAVFGE