Gene Cphy_0008 details

Gene Information

• Locus tag: Cphy_0008
• ID: 5741485
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium phytofermentans ISDg
• Kingdom: Bacteria
• Replicon accession: NC_010001
• Strand: +
• Start bp: 10807
• End bp: 11355
• Gene Length: 549 bp
• Protein Length: 182 aa
• Translation table: 11
• GC content: 36%
• IMG OID: 641291080
• Product: tartrate/fumarate subfamily Fe-S type hydro-lyase beta subunit
• Protein accession: YP_001557138
• Protein GI: 160878170
• COG category: [C] Energy production and conversion
• COG ID: [COG1838] Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain
• TIGRFAM ID: [TIGR00723] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region

Plasmid Coverage information

• Num covering plasmid clones: 53
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATAAGT ATATTACGAC GCCGATAGAT TCATCTAAAG TGGTAGGACT AAAAGCAGGT 
GATTATGTAT ACCTGTCAGG AAAAATATAT ACTGCGAGGG ATGCTGCTCA TAAAAGAATG 
TTCGAGGCGT TACAACAGAA TAAGGAATTA CCTTTTGATA TGACTAATCA AGTTATTTAT 
TATCTTGGTC CTACTCCAGC AAGAGAGGGA CAGGTAATAG GTTCTGCAGG CCCAACTACA 
AGTAGCAGAA TGGATAAGTA TACCCCTACT CTTCTTGATT TAGGTTTAAA AGGAATGATT 
GGTAAAGGAA AAAGAAATGA AGATGTAATC GCTTCCATGG TAAGGAATAA AGCTGTATAT 
TTTGCTGCTG TTGGGGGAGC AGGTGCCTTA CTCTCAAAGT GTATTAAATC ATCTAAGGTA 
ATTGCCTATG AGGATTTAGG CACAGAAGCT ATTCGTGAAT TATGGGTTGA AAATTTACCC 
GTGATTGTAG TTATTGACTC GAATGGTAAT AATTTCTATG AATTACAAAT GAATTCGATA 
AATTCATAG 

 

Protein sequence

MDKYITTPID SSKVVGLKAG DYVYLSGKIY TARDAAHKRM FEALQQNKEL PFDMTNQVIY 
YLGPTPAREG QVIGSAGPTT SSRMDKYTPT LLDLGLKGMI GKGKRNEDVI ASMVRNKAVY 
FAAVGGAGAL LSKCIKSSKV IAYEDLGTEA IRELWVENLP VIVVIDSNGN NFYELQMNSI 
NS