Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_0006 |
Symbol | |
ID | 5744066 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | + |
Start bp | 6932 |
End bp | 9631 |
Gene Length | 2700 bp |
Protein Length | 899 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 641291078 |
Product | DNA gyrase, A subunit |
Protein accession | YP_001557136 |
Protein GI | 160878168 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
TIGRFAM ID | [TIGR01063] DNA gyrase, A subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACGAGA ATATCTTTGA TAAGGTGCAT GATGTCGACC TTAAAAAGAC AATGGAAACC TCCTATATCG AGTATGCCAT GTCGGTTATT GCAGCCAGAG CCCTTCCGGA TGTAAGAGAT GGATTAAAAC CGGTACAGAG AAGAATTTTA TACGCTATGA TAGAGTTAAA TAACGGTCCT GACAAGCCAC ACCGTAAGTG TGCGCGTATT GTCGGTGATA CGATGGGTAA ATATCACCCT CATGGTGATA GCTCTATCTA CGGCGCATTA GTAAATTTAG CACAGGAATG GTCAACCAGA TATCCATTAG TGGATGGTCA CGGTAACTTC GGTTCCGTGG ATGGTGACGG TGCTGCTGCC ATGCGTTACA CCGAAGCTAG ATTAAGTAAA ATCTCCATGG AGATGTTGTC TGATATTAAT AAAGACACCG TTGATTTTGC TCCAAACTTC GATGAAACAG AAAAAGAACC ATTGGTTCTT CCAGCAAGAT ATCCGAATCT TTTGGTAAAT GGAACGTCTG GTATTGCGGT AGGTATGGCA ACCAATATCC CTCCTCACAA CATGAGAGAG ATCATAGGTG CAGTAGTTCG CATTATTGAT AATAAAATTG AGGAAAAGGA AACAACGATT GAAGAATTAT TAGAAATCGT TAAGGGACCG GATTTTCCTA CTGGTGCAAT GATACTTGGT ACAAGAGGGA TTGAAGAAGC ATATCGTACT GGACGAGGAA AGATTCGTGT ACGTGCGGTA ACAAATATTG AGCCAATGGC AAACGGTAAA AACCGTATTA TTGTTACGGA ATTACCTTAC ATGGTAAATA AAGCTCGTTT GATTGAAAAA ATTGCAGAGC TAGTACGTGA TAAAAAGATT GATGGAATTA CGGAACTTCG TGATGAATCT GACAGAGAAG GTATGAGAAT TTGTATTGAA CTTCGTCGTG ATGTGAATGC AAATGTAATC TTAAATCAAT TATATAAACA TACTCAGTTA CAAGATACCT TTGGTGTGAT TATGCTTGCT TTAGTAAATA ATCAGCCAAA AGTACTTACA CTTCTTGAAA TGTTGAGTTA TTACTTAAAG CATCAAGAAG AAGTTGTAAC GAGAAGAATT ACTTATGATT TAAACAAGGC AAAAGAAAGA GCGCATATTT TAGAGGGATT ATTAAAAGCA CTGGATTTTA TTGATGAGGT TATTAATATT ATACGTGCCT CAAAAAATGG TGCTATGGCA AAAGAACGAT TAATCGAGAG ATTTGAGTTT GATGATATTC AGGCGCAAGC AATTATTGAT ATGAGACTTC GTGCGTTAAC AGGTTTGGAA CGCGAGAAGC TTCAGGATGA ATTTGCTGAG CTTCAGAGAA GAATTGCTGA ATTTGAAGCA ATCTTAGCAG ATGAGAAATT ATTGCTTGGT GTCATCAAAG GAGAAATCCA GGTTATTAAT GATAAATTCG GAGATGAAAG AAGAACTTCC ATCGGATTTG ATGAGTTTGA TATTTCCATG GAAGATTTAA TTCCAGATGA AAATACCGTA ATTGCAATGA CACGCTTAGG TTATATCAAG AGAATGACTA TTGATAACTT TAAGAGTCAG CATCGTGGCG GCAAAGGAAT TAAGGGTATG CAGACCATTG ACGAAGACTT TATTGAAGAC TTATTCATGA CTACAACCCA CCACTATATT ATGTTCTTTA CCAACAAAGG TAGAGTATAT CGATTAAAGG CATACGAAAT TCCGGAGTCC TCAAGAACAG CCAGAGGAAC AGCTATCGTA AATCTTCTAC AATTGTTACC AGAGGAAAGA ATTACAGCGA TTATTGCTTT AAAAGAATAT AAAGACAATC GTTATCTGTT TATGGCTACA AAAGATGGTA TTGTGAAAAA GACTAAGATT AAAGAATATC AAAATATTCG AAAGACCGGT CTTCAAGCAA TTAATCTAAG AGAAGATGAC GAATTAATTG AAGTTAAGAC AACCAACAGT CAAAAAGATA TTGTCCTAGT AACTAAAAAC GGTATGTGTA TCCGTTTCCA TGAGAAAGAT GTACGTAATA CTGGTAGAGC ATCTATGGGT GTTATTGGTA TGAATTTAAC TAATGGGGAC GAAGTAGTTG CAATGCAGAT TCACACTCAA GGTAAGTATT TACTTACAGT TTCAGAATAT GGCTTAGGTA AACTAACTGA CCTTGATGAA TTTACTCCAC AAAGACGTGG TGGTAAAGGT GTGAAATGCT ACAAGATTAC CGAGAAGACT GGAAATGTAG TAGGAGCGAA AGCTGTAAAC GAAGAACATG AGGTAATGAT AATAACCAAT GAAGGTATCA TCATTCGCCT TGAAGTAAAC GGTATTAGCA TCCTTGGTAG AATAACTTCT GGTGTTAAGT TAATTAATAT TGATGCGGGT AAGGATATTA GAGTTGCTAG CTTAGCGAAA GTTAAAGAAA GTAGTATGAA TTCAGAAGAA GATGTTCTAA AAAAATTGGA GGAAGAACTA AAAGAAGAAA ATGTAGTAAT ACCTCCAGAA GATGATCAAG AAGAGGAAGA GTATTCTGAA GAGGATGACT CCTTCGAAGG AGATAATTCC CTAGAGGAAG AAGATCTTAT GGATGATACG AAAGACCTTG AGGAATTAGT ATCACGTGCT CTTAAGGATC AAGAAGAACA GGAAGATCAA GAAAAACAAG AAGAAGATCA AGAAGATTAA
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Protein sequence | MDENIFDKVH DVDLKKTMET SYIEYAMSVI AARALPDVRD GLKPVQRRIL YAMIELNNGP DKPHRKCARI VGDTMGKYHP HGDSSIYGAL VNLAQEWSTR YPLVDGHGNF GSVDGDGAAA MRYTEARLSK ISMEMLSDIN KDTVDFAPNF DETEKEPLVL PARYPNLLVN GTSGIAVGMA TNIPPHNMRE IIGAVVRIID NKIEEKETTI EELLEIVKGP DFPTGAMILG TRGIEEAYRT GRGKIRVRAV TNIEPMANGK NRIIVTELPY MVNKARLIEK IAELVRDKKI DGITELRDES DREGMRICIE LRRDVNANVI LNQLYKHTQL QDTFGVIMLA LVNNQPKVLT LLEMLSYYLK HQEEVVTRRI TYDLNKAKER AHILEGLLKA LDFIDEVINI IRASKNGAMA KERLIERFEF DDIQAQAIID MRLRALTGLE REKLQDEFAE LQRRIAEFEA ILADEKLLLG VIKGEIQVIN DKFGDERRTS IGFDEFDISM EDLIPDENTV IAMTRLGYIK RMTIDNFKSQ HRGGKGIKGM QTIDEDFIED LFMTTTHHYI MFFTNKGRVY RLKAYEIPES SRTARGTAIV NLLQLLPEER ITAIIALKEY KDNRYLFMAT KDGIVKKTKI KEYQNIRKTG LQAINLREDD ELIEVKTTNS QKDIVLVTKN GMCIRFHEKD VRNTGRASMG VIGMNLTNGD EVVAMQIHTQ GKYLLTVSEY GLGKLTDLDE FTPQRRGGKG VKCYKITEKT GNVVGAKAVN EEHEVMIITN EGIIIRLEVN GISILGRITS GVKLINIDAG KDIRVASLAK VKESSMNSEE DVLKKLEEEL KEENVVIPPE DDQEEEEYSE EDDSFEGDNS LEEEDLMDDT KDLEELVSRA LKDQEEQEDQ EKQEEDQED
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