| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_0002 |
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| Symbol | |
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| ID | 5744062 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | + |
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| Start bp | 1849 |
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| End bp | 2961 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 641291074 |
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| Product | DNA polymerase III, beta subunit |
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| Protein accession | YP_001557132 |
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| Protein GI | 160878164 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
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| TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 48 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATCG CTTGCCAAAA GAATGAATTG TTAAACAGTG TCAATATTGC TTTGAAAGCA
GTTTCTTCAA AATCGACAAT GCCTATTTTA GAATGTATCG TTATTGAAGT TCAAAATGAT
ACGATTAAAT TAATTTCGAA TGATATGGAA ATTGGTATCG AAACTATTGT AAAAGGTTCC
ATAATTTCTA ATGGTTCTGT TGCAATTAAT GCTAAAGTTT TTTCTGAAAT AATAAGAAAA
CTACCGGATA ATGAAGTAAA TGTTGAAACA GATGAAAAGT TTATGACAAC CATTACCTGT
GAAAAAGCTA AATTTACAAT AGCGGGAAAA TCTGCAGAAG AATTTCCTAT GTTGCCAACC
ATCGAAAAGA AGGAAGCAAT TGAATTATCA CAGTTTACAC TAAAAGAAGT TATACGCCAG
ACTGTTTTTT CTATTTCGGA TAACGAAAGT AATAAAATTA TGACAGGTGA ACTTTTTGAG
ATAAATGGCA ATGAACTTAG AGTTGTTTCA CTGGATGGTC ATCGTATTTC GATACGTAAA
GTCGAACTTA AAAACTCCTA TGCTCCGAAG AAAATTCTTG TTCCAGGAAA AACACTACAA
GAAGTAAGTA AAATTTTATC CGGAGAAATC TCAGATGAAG TATTCATTTA CTATACAGAT
CGCCATGTTT TATTTGTATT TGATGATACT TTAGTACTTT CAAGATTAAT TGAAGGTGAG
TATTACAAAA TTGATCAAAT GCTTTCCGGA GACTATGAAA CAAAAGTTAA AATTAATAAA
AAAGAATTCT TAAGTTGTAT AGATAGAGCG ACTTTGTTAA TTAAAGAAAC CGAGAAAAAG
CCAATTATTG TTGGCATTGA AGATAAAAAA TTAGAATTAA AAATCAATAC CTCCATTGGA
ACAATGGATG AAGATATTGA TATTGAAAAA GAGGGAAAAG ATATACTAAT TGGGTTTAAT
CCTAAGTTTT TAATTGATGC ACTCCGTGTA ATTGATGATG AAGAGGTAGA GATTTACCTC
ATTAATCCAA AGGCACCATG TTTCATAAAA GATAAAGAGG AATCTTATAT TTACTTGATT
CTTCCGGTAA GTTTTAATGC AGCACAATAC TAG
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| Protein sequence | MKIACQKNEL LNSVNIALKA VSSKSTMPIL ECIVIEVQND TIKLISNDME IGIETIVKGS
IISNGSVAIN AKVFSEIIRK LPDNEVNVET DEKFMTTITC EKAKFTIAGK SAEEFPMLPT
IEKKEAIELS QFTLKEVIRQ TVFSISDNES NKIMTGELFE INGNELRVVS LDGHRISIRK
VELKNSYAPK KILVPGKTLQ EVSKILSGEI SDEVFIYYTD RHVLFVFDDT LVLSRLIEGE
YYKIDQMLSG DYETKVKINK KEFLSCIDRA TLLIKETEKK PIIVGIEDKK LELKINTSIG
TMDEDIDIEK EGKDILIGFN PKFLIDALRV IDDEEVEIYL INPKAPCFIK DKEESYIYLI
LPVSFNAAQY
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