| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_4700 |
|---|
| Symbol | |
|---|
| ID | 5756534 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010000 |
|---|
| Strand | + |
|---|
| Start bp | 31968 |
|---|
| End bp | 33446 |
|---|
| Gene Length | 1479 bp |
|---|
| Protein Length | 492 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 641291056 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001557114 |
|---|
| Protein GI | 160873109 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1450] Type II secretory pathway, component PulD |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCACTGT ACAAAAAATT GATAGTAACA GCATTGGTTG CAACCCTTGC TGGCTGTGTT
ACTCAAGATT TTAAGGACAC GAAATCGGCG GCGGATAATA TTCATAACCA GATTGGTGAG
CACAGCCAAT CGCAATACAC CTCGCAAGTT TCCAACATCA TCAGGCCACC CATTTCAACT
ACGCCATTAG CCGTAGAAAA AAACATCCCT TGGCTCAATG ATCCTGTCTC TATCAACTCA
GTGGATATGC CGTTATCGAT GGTGATATCT CAAGTGTTAG CCGGCGCGGA ATATCAAAAC
AAACCGATTA AAATCTGGTT TGACGGCGAC GTAGACCCTA ATCAGCGCGT CACATTGTCG
TTTAAATCCA GCCGAGAAGA CGTGCTCAAC TTATTAGCGA GGCAGACCCA ATACGGTATC
AACACCACAG AGGATAAAGT CAGCATATCG CGCTTTGAGT CTGAGCTATT CGTCATTCAT
TTACCACAGG GCACTTACAG TGGCCAGCTC GGTTCACAGG GTAGTTCGTC TGGCTCGGGT
GCCATGGGCA GCAGCCCTCG CGTCGAAGGG CAGTATCTCA ATACCGCCTA TAGCAACGTC
GATTCTGTCA CAGAGATCGT TACCGGCATC AAAGCGTTGC TGAAAAATGA TGAGAGTGAT
GATGATAAAT TAGTCGGCAG TGTTGAAGCG ATCAAGTCTC TTACCGCTAT CGCAGTACGT
ACTACCCCTG ACCGCATGGT CAATGTTCGC AATCTCGTTA ACAGCGTACA AGAGCAGTTT
GGCCAGCAAG TGGTACTTGA TATTCGCATC CTCGAATTTC GCTCTAATCG CGGCAAAGAG
CGCAGTCTAG ATTGGAACAT TATAAAAGAC GTGGGCAATG GGTCGCTGGA ATTTATGATC
CCAGGCACCA CAACCGTCTC GCAAGGCGCA AGCTATGGAA TGGCATTTAG AGGCACGGGG
AAATGGGATG GCACCGCCGC ATTTATTAGG GCATTAGAGC AACAGGGCAC TGTCTCAACA
GAAACCCCAA TCACCGCGCT AGGCCTGAGT AATCGACCTG CTCGTATCGC TCAGACAATG
ACAACCCCTT ACATCGATGA GATCAAATCC GAGTCTAACG ACAAAGTGAT CACCGCATCC
GTGACAAGAG CATCACAGAG CGAGGGCGTG GATATGATGA TCACACCCAA AGTAATGGAT
GATGCAGTTT GGCTCAGCAT TGCGGGAAAA CTCACAAAAA TCGTCGGTAA GCGCAATGAA
ACAGTGCATG ACGTTCAATT ACTGTTTTTA GATACTCGGG AATCAGAAAT CAATTTTACT
AACAAATTAT TGTATGGCCA AACGGTGGTC ATTGGTTCGA TTAAGCAGAC CAGCACGACA
GCTGAAAGCA ATTCAAATTT TGGCGTACCG AGCGGTGAGG GCACGTTAAG CAACACAGTT
GAAACCCTCG TATTGCTGAC ACCAAGGAAA GTGCAATGA
|
|---|
| Protein sequence | MSLYKKLIVT ALVATLAGCV TQDFKDTKSA ADNIHNQIGE HSQSQYTSQV SNIIRPPIST
TPLAVEKNIP WLNDPVSINS VDMPLSMVIS QVLAGAEYQN KPIKIWFDGD VDPNQRVTLS
FKSSREDVLN LLARQTQYGI NTTEDKVSIS RFESELFVIH LPQGTYSGQL GSQGSSSGSG
AMGSSPRVEG QYLNTAYSNV DSVTEIVTGI KALLKNDESD DDKLVGSVEA IKSLTAIAVR
TTPDRMVNVR NLVNSVQEQF GQQVVLDIRI LEFRSNRGKE RSLDWNIIKD VGNGSLEFMI
PGTTTVSQGA SYGMAFRGTG KWDGTAAFIR ALEQQGTVST ETPITALGLS NRPARIAQTM
TTPYIDEIKS ESNDKVITAS VTRASQSEGV DMMITPKVMD DAVWLSIAGK LTKIVGKRNE
TVHDVQLLFL DTRESEINFT NKLLYGQTVV IGSIKQTSTT AESNSNFGVP SGEGTLSNTV
ETLVLLTPRK VQ
|
|---|
| |