| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_4650 |
|---|
| Symbol | |
|---|
| ID | 5756501 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009999 |
|---|
| Strand | + |
|---|
| Start bp | 59220 |
|---|
| End bp | 60248 |
|---|
| Gene Length | 1029 bp |
|---|
| Protein Length | 342 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 641291007 |
|---|
| Product | transposase IS116/IS110/IS902 family protein |
|---|
| Protein accession | YP_001557065 |
|---|
| Protein GI | 160873059 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3547] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 57 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATATTA AAGTTATTGG TATCGATTTA GCCAAAAATG TTTTTCAAGT TTGTGTTTGT
CTTATGGATA ACTCAGTCAT GACTAACAAA AAGGTTAACA GAAACAAACT GCTCGATAAA
ATTAGACAAT TCCCCGAAGG TAGTCTTATT GCTATGGAGG CCTGTGGTAC GGCGCATTAC
TGGGGAAGAC AATTTCAAGC TCTTGGTTAT CAAGTGCAAT TGATCCCTGC TCAACATGTT
AAGCCATTTG TTGCAAACCA AAAGAATGAT GCCAACGATG CCCTCGCTAT ATGCGAAGCG
GTTTTCAGAC CTAATATCCA CATGGTTCCA GTTAAAACTG TTGAGCAACA AGACATTAAA
GCATTACGTT GTGTACGTAG TCGTCTCGTT CAAAATCGAA CCGCCATGGT CAATCAAATT
CGAAGCCTAG CGAGCGAGTC TGGTGTGATC TTCTCTGTCG GCAGGTTGCA ATTACAAGCG
TCACTTAGCC GTATTTTAGC AAATAATGAG CATGAACTGT CTCATACGCT TCATTACCTG
TTAAAACTTT TATATGAAGA TTTATGTGTT TTAAATGAGA GAATTAATCA AATCGAGCGC
GACATTAAAG CGCTATGTCA AATCCAACCT CGCTACAATG CATTGCTGTC GATCCCTGGC
TTTGGACCAT TAGTCACAGC AAGCTTTATG AGTGAATTAG GTTCGGGTCA TCAATTTAAA
AATGGCCGGC AATTATCTGC ATGGTGTGGC TTAGTGCCAT CGCAATCGAG TTCTGGTGGA
AAAGTTCGAC TAGGATCGAT CACGAAAAAT GGCAGCTCAG AACTACGTGT TTTACTCATC
CATGGCGCCA GAGCCGTTGG CCGATTTGCG AGCAAACGTG ATGATAGACT TGGGCGATGG
TTTAATGCAC TTGCGTTAAG GCAAGGTCGA CACAAAGCCG TTGTCGCATT GGCCAATAAA
ATAGCGCGTA TAGGATGGCG GATCCTCACG AGTAACGATA ATTTCGACGT TAATAAAGCG
TTTGCGTAA
|
|---|
| Protein sequence | MDIKVIGIDL AKNVFQVCVC LMDNSVMTNK KVNRNKLLDK IRQFPEGSLI AMEACGTAHY
WGRQFQALGY QVQLIPAQHV KPFVANQKND ANDALAICEA VFRPNIHMVP VKTVEQQDIK
ALRCVRSRLV QNRTAMVNQI RSLASESGVI FSVGRLQLQA SLSRILANNE HELSHTLHYL
LKLLYEDLCV LNERINQIER DIKALCQIQP RYNALLSIPG FGPLVTASFM SELGSGHQFK
NGRQLSAWCG LVPSQSSSGG KVRLGSITKN GSSELRVLLI HGARAVGRFA SKRDDRLGRW
FNALALRQGR HKAVVALANK IARIGWRILT SNDNFDVNKA FA
|
|---|
| |