| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_4628 |
|---|
| Symbol | |
|---|
| ID | 5756463 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009999 |
|---|
| Strand | - |
|---|
| Start bp | 41424 |
|---|
| End bp | 41867 |
|---|
| Gene Length | 444 bp |
|---|
| Protein Length | 147 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641290986 |
|---|
| Product | type IV conjugative transfer system protein TraV |
|---|
| Protein accession | YP_001557044 |
|---|
| Protein GI | 160873038 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02747] type IV conjugative transfer system lipoprotein TraV |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 69 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAAAA ACGCATTACG TAACACCGGT ATTATCGCAC TGGCTTCATG GCTCGTGAGT
GGCTGTGCGG CGGGGCTGGA TAGTGACTAT TCCTGCGATA AAGTCGGCGG CATCAATGGC
TGCACCAATA TGATGGAAGT GAGGCAACTT ACCGACAGTG GTGTGTTTAA TCAGCCACAA
GCACAAAGCC CTGCGGTGAC GGCCTTAAGC GGTCAAAGCA CAACTGCACT TCCCAAGCTC
GCGAGCCAAC AACAAGACTT TATCCCATTG CCACGCCGCG ACCGCCACGG TGTACCGCTG
CGCACCTCTG AGTCAGTCCA AAAAGTAACC ATCTTCCCGT ATCTCAATGA GCAAGGTGAT
TACGTTGATA CCAGCGATGT CTACATCGTG GTCGATAAGA GCCGTTGGAC GGGTAGACCT
GCCAAATACA TCAAGCAGGA TTAA
|
|---|
| Protein sequence | MSKNALRNTG IIALASWLVS GCAAGLDSDY SCDKVGGING CTNMMEVRQL TDSGVFNQPQ
AQSPAVTALS GQSTTALPKL ASQQQDFIPL PRRDRHGVPL RTSESVQKVT IFPYLNEQGD
YVDTSDVYIV VDKSRWTGRP AKYIKQD
|
|---|
| |