| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_4614 |
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| Symbol | |
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| ID | 5756449 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009999 |
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| Strand | - |
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| Start bp | 18839 |
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| End bp | 24799 |
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| Gene Length | 5961 bp |
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| Protein Length | 1986 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641290972 |
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| Product | conjugative transfer relaxase protein TraI |
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| Protein accession | YP_001557030 |
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| Protein GI | 160873024 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
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| TIGRFAM ID | [TIGR02686] conjugative relaxase domain, TrwC/TraI family
[TIGR02760] conjugative transfer relaxase protein TraI |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.441431 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTTCCA TCAGTCCCAT TGCGTCGAGC GCTGGCGGCG CGGCCAGCTA CTACCTCAGT
GAAGAAAAGA ACCTCAATTT ACCTGACGTG TCGTTAGAAA AAGCAGCGGA CGCCAAAGAA
GGGGAAACCA ACTATTACTT GAAAGAGCAG AGCGCCGAGC CCAATACCCA ATGGTTTGGC
AAACTGGCAG AGCAAGAGGG AATGTTAGGT AAGCCCGTTG AAGAACATCA ACTCAAAGAG
GTGTTAGCCG GTAGCCTGAA CGACCAAACG CTTAAAACCC AAAACAGCAA CGCCCGCAAC
GGTTTTGACT TTACCTTTTC GGCGCCTAAA TCCGTCAGCC TACTTGCACT CGTGGGCGGC
GATAAACGCT TAATGACAGC GCACGATGAC GCGGTAAAAT TCGCGTTATC GCATATCGAG
AAAGATGCGG CGCAGGCCAG ACAAACTAAC CCTGATACCA AAGCGACCTC TTTTGAAAAC
ACGGGCAATT TGCTGTTTGC AATGGTGCGT CACAAAACCA GCCGTGAAGA AGATCCGCAG
CTGCACACCC ACTCACTCAC CGCCAACATG ACCAAGGACA GCGAGGGCAC ATTGCGCGCG
CTGGCAAGCA GCTTTAAACA AAAAGGCGGC ATCATCAATG GCACGGGTGA GCGGGTTTAT
AACCATCAAA AATACTATAC CTCGCTCTAT CAAAGCGCCT TAGCCCGCAG CGTTGAACAA
GCGGGTTATC AAACTCGTTC ACTGGGTAAT AATTTGTTTG AAGTGGAAGG TGTCCCGCAG
TCCTTACTCG ATACATTTTC AACCCGTAGC CAGCAAATCA ACGAACAAAC CCAAAGCTTA
GGTTTAGACT CCCAAGCGGC GCGGGATGTG GCCGCAAAAG ACACCCGCAA GAGTAAAGCC
TATACCAGCG AAGCCACCTT GTTTGAGCAA TGGAAAAACA AAGCCAATAA CAGCGGCTTT
AACCTGACAA GCTTCGTGAC GGACAGCATG TCACGAGAAA CATCACTCAA TGCGTTAGCG
CTCAAACCCG CCGCTATCGA TGCGGTGAGT CGTGCGATTG AGCACGCCAG TAACACCCAA
AACCGTTTTA ATTACGCGAA ATTAGTGGAA TCAGCCACGC TTGAATTTAC GCGCGGCCAG
AAGCTCAATG CGCTCGATAT TAAATTGGCA CTCGATAAGC ACATTGAAGA TGGCGCACTC
ATTCCGCTTG ATAAAGAGTC TGCAACCTTT ACCAGCGCCG CCCACCTCAA AGCAGAAACC
AACCTGCTAG AGAGTATCAA GCCCAAAACG GCCAACATGC GCCAAGTGGT CGATACCAAC
ACGCTTCAAG GCAAAGGCTT AAATGCGGAC AACCAAAAGA AAGTCTCTGA ACTGTTCGCC
AGCACAAAAC AAGTTAACCT AGTGAACGTC TTTGGTAGCA GTGAACAGCT CGCAACCGCC
CTATTAAATG TCGGTGAGGC CAACGGTAAA CGTATTCACA TCATTACCCC TGACATGAAA
AGCAAACTGC ACACCAGTGA ACGGGTACAA CGGGACTCAT CGACTATTGG CAAGTGGATA
ATGAACCACT TCAAACCTGA CCACACCCAT ACACTCAGCA GCTTTACTAA AACGGCCAAC
AACACTAACC GCGATATTTT AGTGGTTGAG AACGCCAATA AACTCGGCCT TAACGACTTC
AATGCCCTGC TCGCGCAAGC CAAAGCGGGT AACAGTAAAG TGATTTTGCT CAATCACGCC
AATGCCAAGC AAGGCATGAA AGCCGGTAAC GCTATCGAGG TACTTAAAAA AGGCAACGTA
AACGAAAGCA ACTGGGTCGC CACCAAACAA AGCAACACAG CCATGCGACT GCATGAAAGC
AAAGACAGTG ACAGGGTTAA CCTGATTGCA AAAACTTACG CGCAACTGCC CGAGAAGCAA
CACACCCAAG TCATTGCGGG CACCCATAAA GACGTGAAGC AGCTTAACAG CGCCATTCGC
GCAGAACTGC AAAATCAAGG TGACGTATCG CGCCTTGGGC TCAACATCCC TACCCTTAAT
CCCGTGTTCT TATCCGCGCA GCAACGGGAA GTCGTCGGCC AGTACACCAA GGGCATGGTA
CTCACCCAAT GGCAAAAAGT CGGCGGCCGC AATCAACAGC AGCAATTGAC GGTGGACAGT
GTAAACCGTG ATAACAACAC CCTAACGCTG GTCGATAAGC AGGGTAAATC GACAGCGATT
GATCCCAGCA GCAAAGCCTT TAAAGCCGCA GAGTACGCGA TCGCTAAACC GGACAATTTA
CATATCGCCA ACGGCGACAA ACTCATCATG GCCACAAACC ATCAAGACAG TGGTTTGAGC
AAACAAATTT ATACAATCAA CGCCCTATCC AAAGAATGGG TCACGCTCAA AGACGAAAGC
GGCAAACAGC ACAGCGTTAA AGCCAGTGCA TTGCACCATG CGCCGCTCAA TCATGGTTAC
GCCACCACGC CAAGCAATGC CAGCCCTAAT GCAAGTCACC ACATCGTCAA CATTAAAGCC
TATAGCGCCT CAAAAGAGTG GTTACATGAC ACCCTGACAC AAGGCATCAA ACACATCGAT
ATATTCACCG ACAAGGCACA ACAATTTGAT GACCGACTAG AAAAAAGTGA GGTGAAACCA
TCCAGTATTT CGCGCATCAT GCAAGCCGCT GACATGCCAG AAAAGTTCGT GAATAGCCAA
ACCACGGCCC TGCTCACCCA AGATGTGACC GCAGCACTGA ATGCCATTGG TGCCCAGCAT
CAAGACAAAG GGCTTATTCA CAATGCCGTG GACTTTGCCA TCCAGCACAT TAGCGAGAAA
GAAGCCGGTT ACTCACAAAA AGAGCTGATT GTTAATGCGA TCAAGTACGC CTTTGAGGAA
AAAGGCACCA GCATTACCCA ACATGAAATC ATCAACACCC TGCAACACAT GGCCACGAAC
AGCACGGATA AAGGCGCGCC CTCACTCCTG AGCGCTGAAT ACCACGACGG CACCCGCTGG
ACCACCCAAG CCGCTATCGA TACCGAATTG CGTATTTTAG ACAGACTGCA AGCGGGCAAA
GACCAACTTG CGCCCCTAAC CAGCGTTGAA CACGCCGCGC AGGTACTCAG TCAAAATCAA
AACCTGACCG ATGGCCAAAA AGACTCGACC TTATTGATCA CCACCACCAA AGACCGATTT
GTAGGTGTTC AAGGGTTAGC GGGTACGGGT AAATCGACCA TGCTTGAAAC GGGTATCGAT
CTTGTTAAAC AAAGCGAATC CATTCTCAAC ACACAACCCG ATAAGACACC GACACAATTC
ATAGGTCTAG CGCCGACACA CGCCGCCGTT AACGAACTCA AAGACAAGAA CGTCGAAAGC
CAAACGGTGC AATCACTCCT AAGCAACTTT TTAAGCCAAG ATGCGAAACC GGACCAATAC
GCCAACACCG TGTTCTTGCT CGATGAATCC TCGATGACCA GTAACGCCCA AATGGATAAA
TTTACCCATT TGATTGAGAC AACAGGCGCG CGCGCCGTGT TCTTGGGTGA CACTAAACAG
CTAACGTCCC AAGAAGCGGG TAAACCTTTT GAACTCGCGT TAAACAAAGG CGCAATCAAT
AGCGTCACCA TGAAAGACAT TGTGCGCCAA CAGAACAGCA CGCTACTGAG TGCAGTACAC
AATATTGTCG ATCGCCAAGG CGAAAGCGCT ATTGATAAAA TTCAGCAACA ATTACCCTTT
GACCAATACA CCGCGCCCAC TGCGAACGAC GCGGTAACGC CCGAAAAGCA GGCTACCGCT
AACATCAATC AAAGCTTGAA TATCATTTCA ACTTTGCAGT TGATAACCGA TAACCCGAAG
AAAAACCAGC AACTGGCGAC CGAAGCCCTG CCCGCCACGG TGGCACTGGA ATACTTGGCC
AGAACACCTA AAGCGCGTGA AAATACCCTT ATCATTGCGT ACACCAACAA GGAACGCGAC
GACATTACCC ACGAAATCCG CCAAGGGTTA CAGCAACAAA AAAGCCTCAG TACCGAGCAA
TTCACCGTAC CGAGATTACG TGGAGTCCAT GCCAGCAAGG CCGAACTGGC GACCATGTTG
CCCTATCAGC AGGGGTTAAT CCTGACGACC AGTAAAGACA GTTATTTTGA AATTATGAAG
GTCGATAAGC TCAATAACAT GCTCACCCTC GCGGATATGA AAACCGGCGA GGAAAAGCAT
TTCTTCCCCA AAAATCATGG CCACAAATTC ACGAACCTTT GGGCTAAGAG TGAGCAACCT
CTCGCAGAAG GCGACAGTAT CATGCTCCGC AAAAGCGATA TTGACCGTGA AATGCAGGGC
AACAAAACCT ATACCGTTAG CAGCATTGAC GATAAACAAA TGCAGCTCAA ATCCACGGAT
AACCACACAT TAACGCTCTC AACCAAAGAT TTGAAAGATG CTCATTGGGA TTACGCATAC
ACCCGCACCG CCGATATGGC GCAAGGGGCA ACCTATGAGA ATGTCATTAC CGCGATTAAG
GGCCAAGGTG CATTAACTAA CGTAAGGCGC GCGTATATCG ATATCACCCG TGCCAGTAAG
CACGTAAAAA TCATCACCGA TAACCCGCAA AAAATGATGC TCTCATGGGT CAATAACGAT
CCCAATAAAG TCTCTGCACT TGAGACAAGA GATAAGTATT ACCCTGAACA TACCCCGCTA
TTTAATGACA AACCCTTGCC GCAGGAAAAC CCAAAGTACC TCGATGTGAA TGGATATGTG
GATCTAAAAC GGATGGCCAC TGAGCTAAAT GCCAAGCTTC CGGCCTACAG TGAATCGCTG
GCAACGCAGC TTTTAGGTGA GCCGAACCAC GATAAATCAG ACAAAGATAA CCTGACATTT
GGCAAAGAGG GGAGCCTAAC ATTGACCACA ACGGGCCAAT ATCGTGGCTA TTTTAAAGAC
TGGAAAACCG GCGATAAAGG CACCCTAATT AACCTGATTA TGGTCGCTGA AAAATGCAGT
TATAAGGATG CACTTTATAA AGCCGATAAA ATGATGAACG AACCCGATAA ATATAATCTG
GTAAAAAACC CACAGCATGA TGAATTAACA CATGCCATTC CGGTTAAGCA AAGTCAATTA
GAAGCGCGCG CGAAGCAATA CTTTAATGAA GCGAAACCTA TCGAAAACTC ACTCGCACAG
ACATATTTAA ACAAGCAAGG CATCGACGTT AAGCAGCATG AAAACTTACG TTTTCACGAT
GCCGTTTATT CGTCAGAAAA ACGTGGGACC TTCCCCGCAT TAATTGCGAA CATCACCAAT
GATAAGGATG AGACCAAGGC AGTAGAAATT ACTTACCTTG ATAAATCCAG CGGTGACATT
GCAGCGCTTA AAATAAACAA GCGCATACTC GGCTCTAAAT CGGGGAACAG CACGACGATC
AACAAAGGCA ATAATTCAGA CTATAGCATT GTCGCTGTCG GGGTAGAGAA TGCACTTAAG
ATAAATGCTA ACAATAAAAA CGGGGCTGAC GTTATTGCGC TAAACAATAA TAATGACACT
AAAACATTCA ATACAAATGA ATTGCGCGAA AACGTGATAG TGGTACTTGA TACTAATAAT
TCACAAGACA CTGCAAAACT GGCTAATGAC CTTACCGAAA AATTCAGCAA GGAAAATATA
CATGCGGTAA TTATTGAACC CAATCTGATA CCTGACGGCT TAAACAAAGT CGAAACGACA
AAGCAATTAG TCAACGAAGC GATCTATAAC ATAACAACAA AAGACAACAC CCTATCTAAA
GCCATTCAAT CATTGAGTCA TGATATTGCA GGCACAAAAA ATATCACGAT GAAAGATGAC
AGCACTAACG TAACGACGAA TAAAATAAAG CACGATGAAC ACTATCAACA TTTAGCAATG
GATAGCCACC GTTCAACGAC GAAAGAATAC TCCCCCAACA TCGACAATCC TAAATTGGAT
ATTGGGGAAA AGACCATGTA A
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| Protein sequence | MLSISPIASS AGGAASYYLS EEKNLNLPDV SLEKAADAKE GETNYYLKEQ SAEPNTQWFG
KLAEQEGMLG KPVEEHQLKE VLAGSLNDQT LKTQNSNARN GFDFTFSAPK SVSLLALVGG
DKRLMTAHDD AVKFALSHIE KDAAQARQTN PDTKATSFEN TGNLLFAMVR HKTSREEDPQ
LHTHSLTANM TKDSEGTLRA LASSFKQKGG IINGTGERVY NHQKYYTSLY QSALARSVEQ
AGYQTRSLGN NLFEVEGVPQ SLLDTFSTRS QQINEQTQSL GLDSQAARDV AAKDTRKSKA
YTSEATLFEQ WKNKANNSGF NLTSFVTDSM SRETSLNALA LKPAAIDAVS RAIEHASNTQ
NRFNYAKLVE SATLEFTRGQ KLNALDIKLA LDKHIEDGAL IPLDKESATF TSAAHLKAET
NLLESIKPKT ANMRQVVDTN TLQGKGLNAD NQKKVSELFA STKQVNLVNV FGSSEQLATA
LLNVGEANGK RIHIITPDMK SKLHTSERVQ RDSSTIGKWI MNHFKPDHTH TLSSFTKTAN
NTNRDILVVE NANKLGLNDF NALLAQAKAG NSKVILLNHA NAKQGMKAGN AIEVLKKGNV
NESNWVATKQ SNTAMRLHES KDSDRVNLIA KTYAQLPEKQ HTQVIAGTHK DVKQLNSAIR
AELQNQGDVS RLGLNIPTLN PVFLSAQQRE VVGQYTKGMV LTQWQKVGGR NQQQQLTVDS
VNRDNNTLTL VDKQGKSTAI DPSSKAFKAA EYAIAKPDNL HIANGDKLIM ATNHQDSGLS
KQIYTINALS KEWVTLKDES GKQHSVKASA LHHAPLNHGY ATTPSNASPN ASHHIVNIKA
YSASKEWLHD TLTQGIKHID IFTDKAQQFD DRLEKSEVKP SSISRIMQAA DMPEKFVNSQ
TTALLTQDVT AALNAIGAQH QDKGLIHNAV DFAIQHISEK EAGYSQKELI VNAIKYAFEE
KGTSITQHEI INTLQHMATN STDKGAPSLL SAEYHDGTRW TTQAAIDTEL RILDRLQAGK
DQLAPLTSVE HAAQVLSQNQ NLTDGQKDST LLITTTKDRF VGVQGLAGTG KSTMLETGID
LVKQSESILN TQPDKTPTQF IGLAPTHAAV NELKDKNVES QTVQSLLSNF LSQDAKPDQY
ANTVFLLDES SMTSNAQMDK FTHLIETTGA RAVFLGDTKQ LTSQEAGKPF ELALNKGAIN
SVTMKDIVRQ QNSTLLSAVH NIVDRQGESA IDKIQQQLPF DQYTAPTAND AVTPEKQATA
NINQSLNIIS TLQLITDNPK KNQQLATEAL PATVALEYLA RTPKARENTL IIAYTNKERD
DITHEIRQGL QQQKSLSTEQ FTVPRLRGVH ASKAELATML PYQQGLILTT SKDSYFEIMK
VDKLNNMLTL ADMKTGEEKH FFPKNHGHKF TNLWAKSEQP LAEGDSIMLR KSDIDREMQG
NKTYTVSSID DKQMQLKSTD NHTLTLSTKD LKDAHWDYAY TRTADMAQGA TYENVITAIK
GQGALTNVRR AYIDITRASK HVKIITDNPQ KMMLSWVNND PNKVSALETR DKYYPEHTPL
FNDKPLPQEN PKYLDVNGYV DLKRMATELN AKLPAYSESL ATQLLGEPNH DKSDKDNLTF
GKEGSLTLTT TGQYRGYFKD WKTGDKGTLI NLIMVAEKCS YKDALYKADK MMNEPDKYNL
VKNPQHDELT HAIPVKQSQL EARAKQYFNE AKPIENSLAQ TYLNKQGIDV KQHENLRFHD
AVYSSEKRGT FPALIANITN DKDETKAVEI TYLDKSSGDI AALKINKRIL GSKSGNSTTI
NKGNNSDYSI VAVGVENALK INANNKNGAD VIALNNNNDT KTFNTNELRE NVIVVLDTNN
SQDTAKLAND LTEKFSKENI HAVIIEPNLI PDGLNKVETT KQLVNEAIYN ITTKDNTLSK
AIQSLSHDIA GTKNITMKDD STNVTTNKIK HDEHYQHLAM DSHRSTTKEY SPNIDNPKLD
IGEKTM
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